RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 SHISA5Q8N114 240 aa8.7□□□□□ -1.02
PCM1-216ENST00000522777 BVESQ8NE79 360 aa8.7□□□□□ -1.02
PCM1-216ENST00000522777 RCC1LQ96I51 464 aaKnown RBP8.7□□□□□ -1.02
PCM1-216ENST00000522777 HEXIM2Q96MH2 286 aaKnown RBP8.7□□□□□ -1.02
PCM1-216ENST00000522777 PRDM5Q9NQX1 630 aaPredicted RBP8.7□□□□□ -1.02
PCM1-216ENST00000522777 PRR13Q9NZ81 148 aa8.7□□□□□ -1.02
PCM1-216ENST00000522777 RAXQ9Y2V3 346 aa8.7□□□□□ -1.02
PCM1-216ENST00000522777 EMC9Q9Y3B6 208 aa8.7□□□□□ -1.02
PCM1-216ENST00000522777 FHOD1Q9Y613 1164 aa8.7□□□□□ -1.02
PCM1-216ENST00000522777 ANKRD50Q9ULJ7 1429 aa8.7□□□□□ -1.02
PCM1-216ENST00000522777 UNC13BO14795 1591 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 EP400Q96L91 3159 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 XRN1Q8IZH2 1706 aaKnown RBP8.69□□□□□ -1.02
PCM1-216ENST00000522777 PPM1BO75688 479 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 CLSTN1O94985 981 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 CYP7A1P22680 504 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 GSK3AP49840 483 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 ZC3H12BQ5HYM0 836 aaKnown RBP8.69□□□□□ -1.02
PCM1-216ENST00000522777 OGFOD3Q6PK18 319 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 ARHGEF39Q8N4T4 335 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 DTWD2Q8NBA8 298 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 LRRN4CLQ8ND94 238 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 ADCY4Q8NFM4 1077 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 KISS1RQ969F8 398 aaPredicted RBP8.69□□□□□ -1.02
PCM1-216ENST00000522777 TBC1D32Q96NH3 1257 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 AARSD1Q9BTE6 412 aaKnown RBP8.69□□□□□ -1.02
PCM1-216ENST00000522777 CGGBP1Q9UFW8 167 aaPredicted RBP8.69□□□□□ -1.02
PCM1-216ENST00000522777 MYOM2P54296 1465 aa8.69□□□□□ -1.02
PCM1-216ENST00000522777 A0A087WZG4 1122 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 PPP1R12AO14974 1030 aaPredicted RBP8.68□□□□□ -1.02
PCM1-216ENST00000522777 ASMTLO95671 621 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 ZNF865P0CJ78 1059 aaPredicted RBP8.68□□□□□ -1.02
PCM1-216ENST00000522777 GRIA2P42262 883 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
PCM1-216ENST00000522777 SFRP5Q5T4F7 317 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 TMC3Q7Z5M5 1100 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 ADAT2Q7Z6V5 191 aaKnown RBP8.68□□□□□ -1.02
PCM1-216ENST00000522777 TRIM59Q8IWR1 403 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 SYNPOQ8N3V7 929 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 GIMAP7Q8NHV1 300 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 SYTL5Q8TDW5 730 aaPredicted RBP8.68□□□□□ -1.02
PCM1-216ENST00000522777 TP53INP1Q96A56 240 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 SUGT1Q9Y2Z0 365 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 NPHP3Q7Z494 1330 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 RALGAPBQ86X10 1494 aa8.68□□□□□ -1.02
PCM1-216ENST00000522777 PRR33A8MZF0 331 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 ITGB2P05107 769 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 LAMC1P11047 1609 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 KIR3DL1P43629 444 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 TCEA2Q15560 299 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 PRR23CQ6ZRP0 262 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 KRT27Q7Z3Y8 459 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 BRF1Q92994 677 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 PPP1R14AQ96A00 147 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 GPATCH3Q96I76 525 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 GFOD1Q9NXC2 390 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 FBXL21Q9UKT6 434 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 CD2APQ9Y5K6 639 aa8.67□□□□□ -1.02
PCM1-216ENST00000522777 COL22A1Q8NFW1 1626 aaPredicted RBP8.66□□□□□ -1.02
PCM1-216ENST00000522777 ADGRL2O95490 1459 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 FAM170BA6NMN3 283 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 IGF2BP3O00425 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
PCM1-216ENST00000522777 CBX7O95931 251 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 FGFR1P11362 822 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 L1CAMP32004 1257 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 GATA4P43694 442 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 GYS2P54840 703 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 ZNF765Q7L2R6 523 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 FIBCD1Q8N539 461 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 STOML1Q9UBI4 398 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 AKT3Q9Y243 479 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 MRPS23Q9Y3D9 190 aaKnown RBP8.66□□□□□ -1.02
PCM1-216ENST00000522777 CAPN6Q9Y6Q1 641 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 U3KQE9 123 aa8.66□□□□□ -1.02
PCM1-216ENST00000522777 SHISA3A0PJX4 238 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 SIGLEC6O43699 453 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 HSP90B1P14625 803 aaKnown RBP8.65□□□□□ -1.02
PCM1-216ENST00000522777 R3HDM1Q15032 1099 aaKnown RBP8.65□□□□□ -1.02
PCM1-216ENST00000522777 BTN2A2Q8WVV5 523 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 OSBP2Q969R2 916 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 MFSD14AQ96MC6 490 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 DHRS4Q9BTZ2 278 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 NOL6Q9H6R4 1146 aaKnown RBP8.65□□□□□ -1.02
PCM1-216ENST00000522777 STK17AQ9UEE5 414 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 GTF2IRD1Q9UHL9 959 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 PRKAB1Q9Y478 270 aa8.65□□□□□ -1.02
PCM1-216ENST00000522777 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.03
PCM1-216ENST00000522777 LRPPRCP42704 1394 aaKnown RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 NALCNQ8IZF0 1738 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 TRBV23-1A0A0A0MS06 115 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 CCDC163A0A0D9SF12 145 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 NOP56O00567 594 aaKnown RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 PRAMEF1O95521 474 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 F13BP05160 661 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 TNK2Q07912 1038 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 NMIQ13287 307 aaPredicted RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 GRB10Q13322 594 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms