RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 FTOQ9C0B1 505 aaKnown RBP eCLIP15.32■□□□□ 0.04
CLK4-210ENST00000522136 CPA4Q9UI42 421 aa15.32■□□□□ 0.04
CLK4-210ENST00000522136 CCDC194A0A1B0GVG4 234 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 ERCC3P19447 782 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 GCLCP48506 637 aaPredicted RBP15.31■□□□□ 0.04
CLK4-210ENST00000522136 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
CLK4-210ENST00000522136 TKFCQ3LXA3 575 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 SLC30A10Q6XR72 485 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 GPRC5AQ8NFJ5 357 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 GTF3C2Q8WUA4 911 aaPredicted RBP15.31■□□□□ 0.04
CLK4-210ENST00000522136 PORCNQ9H237 461 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 ZCCHC17Q9NP64 241 aaKnown RBP15.31■□□□□ 0.04
CLK4-210ENST00000522136 MYH7BA7E2Y1 1941 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 ADGRA2Q96PE1 1338 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 WNT7AO00755 349 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 CEBPZQ03701 1054 aaKnown RBP15.31■□□□□ 0.04
CLK4-210ENST00000522136 INF2Q27J81 1249 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 PURBQ96QR8 312 aaKnown RBP15.31■□□□□ 0.04
CLK4-210ENST00000522136 GLT8D2Q9H1C3 349 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 ACAD9Q9H845 621 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 EFCC1Q9HA90 598 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 COL20A1Q9P218 1284 aa15.31■□□□□ 0.04
CLK4-210ENST00000522136 RBBP6Q7Z6E9 1792 aaKnown RBP15.3■□□□□ 0.04
CLK4-210ENST00000522136 PIK3CDO00329 1044 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
CLK4-210ENST00000522136 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
CLK4-210ENST00000522136 NCLP19338 710 aaKnown RBP15.3■□□□□ 0.04
CLK4-210ENST00000522136 HSD17B4P51659 736 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 RPS6P62753 249 aaKnown RBP15.3■□□□□ 0.04
CLK4-210ENST00000522136 CRHR2Q13324 411 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 BAATQ14032 418 aaPredicted RBP15.3■□□□□ 0.04
CLK4-210ENST00000522136 KRT25Q7Z3Z0 450 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 MCF2L2Q86YR7 1114 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 MORF4L1Q9UBU8 362 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 ATP6V1DQ9Y5K8 247 aa15.3■□□□□ 0.04
CLK4-210ENST00000522136 NONOQ15233 471 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLK4-210ENST00000522136 WDR78Q5VTH9 848 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 RNF207Q6ZRF8 634 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 TBCKQ8TEA7 893 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 ZFYVE28Q9HCC9 887 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 A1CFQ9NQ94 594 aaKnown RBP15.29■□□□□ 0.04
CLK4-210ENST00000522136 CNPY2Q9Y2B0 182 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 EDIL3O43854 480 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 TLR2O60603 784 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 SLC25A27O95847 323 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 C1QTNF8P60827 252 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 SYTL5Q8TDW5 730 aaPredicted RBP15.29■□□□□ 0.04
CLK4-210ENST00000522136 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 CLIC4Q9Y696 253 aa15.29■□□□□ 0.04
CLK4-210ENST00000522136 ZNFX1Q9P2E3 1918 aaKnown RBP15.28■□□□□ 0.04
CLK4-210ENST00000522136 SPDYE3A6NKU9 549 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 CA12O43570 354 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 BCRP11274 1271 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 UBXN2AP68543 259 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 GHRHRQ02643 423 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 FAM110CQ1W6H9 321 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 C17orf99Q6UX52 265 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 CYP39A1Q9NYL5 469 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 PCDHB6Q9Y5E3 794 aa15.28■□□□□ 0.04
CLK4-210ENST00000522136 AP3B2Q13367 1082 aa15.27■□□□□ 0.04
CLK4-210ENST00000522136 RILPL1Q5EBL4 403 aa15.27■□□□□ 0.04
CLK4-210ENST00000522136 ANKRD35Q8N283 1001 aa15.27■□□□□ 0.04
CLK4-210ENST00000522136 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.04
CLK4-210ENST00000522136 FBXO40Q9UH90 709 aa15.27■□□□□ 0.04
CLK4-210ENST00000522136 LCTP09848 1927 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 FOSP01100 380 aaPredicted RBP15.27■□□□□ 0.03
CLK4-210ENST00000522136 HSPA6P17066 643 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 MAP2K2P36507 400 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 CCNA1P78396 465 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 ZNF174Q15697 407 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 CLEC17AQ6ZS10 378 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 SHCBP1Q8NEM2 672 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 MROH8Q9H579 483 aa15.27■□□□□ 0.03
CLK4-210ENST00000522136 NOL7Q9UMY1 257 aaKnown RBP15.27■□□□□ 0.03
CLK4-210ENST00000522136 DOCK3Q8IZD9 2030 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 FIBPO43427 364 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 KRT85P78386 507 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 CNTN2Q02246 1040 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 SF3A1Q15459 793 aaKnown RBP15.26■□□□□ 0.03
CLK4-210ENST00000522136 LETM2Q2VYF4 491 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 TTC38Q5R3I4 469 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 NEK8Q86SG6 692 aa15.26■□□□□ 0.03
CLK4-210ENST00000522136 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
CLK4-210ENST00000522136 MAP3K20Q9NYL2 800 aaKnown RBP15.26■□□□□ 0.03
CLK4-210ENST00000522136 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
CLK4-210ENST00000522136 MCM7P33993 719 aa15.25■□□□□ 0.03
CLK4-210ENST00000522136 COPB2P35606 906 aa15.25■□□□□ 0.03
CLK4-210ENST00000522136 ANO1Q5XXA6 986 aa15.25■□□□□ 0.03
CLK4-210ENST00000522136 CCAR1Q8IX12 1150 aaKnown RBP15.25■□□□□ 0.03
CLK4-210ENST00000522136 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
CLK4-210ENST00000522136 SAMD3Q8N6K7 520 aa15.25■□□□□ 0.03
CLK4-210ENST00000522136 MMP19Q99542 508 aa15.25■□□□□ 0.03
CLK4-210ENST00000522136 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
CLK4-210ENST00000522136 PLXNB2O15031 1838 aa15.25■□□□□ 0.03
CLK4-210ENST00000522136 TRPA1O75762 1119 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms