RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TLDC2A0PJX2 215 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 GADD45BO75293 160 aaPredicted RBP17.8■□□□□ 0.44
USP42-207ENST00000521713 SLC8A1P32418 973 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 ARHGAP24Q8N264 748 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 METTL14Q9HCE5 456 aaKnown RBP17.8■□□□□ 0.44
USP42-207ENST00000521713 E9PCH4 1651 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 KLHL30Q0D2K2 578 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 TFDP1Q14186 410 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 PPP1R7Q15435 360 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 EXOC8Q8IYI6 725 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 MIPOL1Q8TD10 442 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 DYNLL2Q96FJ2 89 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 GPR101Q96P66 508 aaPredicted RBP17.8■□□□□ 0.44
USP42-207ENST00000521713 TXNDC16Q9P2K2 825 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 K7ENM7 598 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 FAM26FQ5R3K3 315 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 MIGA2Q7L4E1 593 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 SYNE4Q8N205 404 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 VCX3BQ9H321 246 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 PANK4Q9NVE7 773 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 ARMCX3Q9UH62 379 aaPredicted RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 PALM3A6NDB9 673 aaPredicted RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 SPOUT1Q5T280 376 aaKnown RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 DCUN1D2Q6PH85 259 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 ZNF577Q9BSK1 485 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 GAS8O95995 478 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 YARSP54577 528 aaKnown RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 PNOCQ13519 176 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 CCDC38Q502W7 563 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 TAOK1Q7L7X3 1001 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 UBL4BQ8N7F7 174 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 PIGSQ96S52 555 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 RTEL1Q9NZ71 1219 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 PRPF3O43395 683 aaKnown RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 MAGEA1P43355 309 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 RSPH3Q86UC2 560 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 C17orf53Q8N3J3 647 aaPredicted RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 NSUN7Q8NE18 718 aaKnown RBP17.79■□□□□ 0.44
USP42-207ENST00000521713 KCNK9Q9NPC2 374 aa17.79■□□□□ 0.44
USP42-207ENST00000521713 A0A1W2PQ27 194 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 A0A1W2PQ64 194 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 A0A1W2PQD8 194 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 INO80Q9ULG1 1556 aaPredicted RBP17.78■□□□□ 0.44
USP42-207ENST00000521713 TNNC2P02585 160 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 SFMBT2Q5VUG0 894 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 FYB2Q5VWT5 728 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 VGLL3A8MV65 326 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 ATF7P17544 494 aaPredicted RBP17.78■□□□□ 0.44
USP42-207ENST00000521713 SLC16A2P36021 539 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 CYP2J2P51589 502 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 NEDD9Q14511 834 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
USP42-207ENST00000521713 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 C2orf69Q8N8R5 385 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 RDH13Q8NBN7 331 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 SLC7A3Q8WY07 619 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 MRFAP1L1Q96HT8 127 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 PSMD1Q99460 953 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 PLCB1Q9NQ66 1216 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 ADAMTS13Q76LX8 1427 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 SLC39A14Q15043 492 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 NACA2Q9H009 215 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 SPON1Q9HCB6 807 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 CTTNBP2NLQ9P2B4 639 aa17.78■□□□□ 0.44
USP42-207ENST00000521713 GOLGA8KD6RF30 607 aa17.77■□□□□ 0.44
USP42-207ENST00000521713 PRDX5P30044 214 aa17.77■□□□□ 0.44
USP42-207ENST00000521713 FAM71BQ8TC56 605 aa17.77■□□□□ 0.44
USP42-207ENST00000521713 ABT1Q9ULW3 272 aaKnown RBP17.77■□□□□ 0.44
USP42-207ENST00000521713 PCDHA7Q9UN72 937 aa17.77■□□□□ 0.44
USP42-207ENST00000521713 CYP4A11Q02928 519 aa17.77■□□□□ 0.44
USP42-207ENST00000521713 HPDP32754 393 aaPredicted RBP17.77■□□□□ 0.44
USP42-207ENST00000521713 USP17L2Q6R6M4 530 aa17.77■□□□□ 0.44
USP42-207ENST00000521713 SECISBP2LQ93073 1101 aaKnown RBP17.77■□□□□ 0.44
USP42-207ENST00000521713 USH1CQ9Y6N9 552 aa17.77■□□□□ 0.44
USP42-207ENST00000521713 PPRC1Q5VV67 1664 aaKnown RBP17.77■□□□□ 0.44
USP42-207ENST00000521713 LRRIQ4A6NIV6 560 aa17.77■□□□□ 0.43
USP42-207ENST00000521713 DAPK3O43293 454 aa17.77■□□□□ 0.43
USP42-207ENST00000521713 PPP6R2O75170 966 aa17.77■□□□□ 0.43
USP42-207ENST00000521713 ZNF526Q8TF50 670 aaPredicted RBP17.77■□□□□ 0.43
USP42-207ENST00000521713 ZNF341Q9BYN7 854 aa17.77■□□□□ 0.43
USP42-207ENST00000521713 EFCC1Q9HA90 598 aa17.77■□□□□ 0.43
USP42-207ENST00000521713 FAM169AQ9Y6X4 670 aa17.77■□□□□ 0.43
USP42-207ENST00000521713 CCND2P30279 289 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 SUGT1Q9Y2Z0 365 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 QRICH2Q9H0J4 1663 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 APOBEC3FQ8IUX4 373 aaKnown RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 RETREG2Q8NC44 543 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 CPDO75976 1380 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 ERCC5P28715 1186 aaPredicted RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 MRPS9P82933 396 aaKnown RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 AOC3Q16853 763 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 CEP85LQ5SZL2 805 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 ARMCX5Q6P1M9 558 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 CRAMP1Q96RY5 1269 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 KIAA1024Q9UPX6 916 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 NRKQ7Z2Y5 1582 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms