RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 IQSEC1Q6DN90 963 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 AMNQ9BXJ7 453 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 MAF1Q9H063 256 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 VTA1Q9NP79 307 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 MRPL11Q9Y3B7 192 aaKnown RBP20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 LRRC37A2A6NM11 1700 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 BAZ2BQ9UIF8 2168 aaKnown RBP20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 ZBTB5O15062 677 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 CTAGE5O15320 804 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 C6orf222P0C671 652 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 SMPD1P17405 629 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 CST5P28325 142 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 ACLYP53396 1101 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 TMEM63BQ5T3F8 832 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 RASEFQ8IZ41 740 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 ZNF654Q8IZM8 581 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 TMTC2Q8N394 836 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 DNERQ8NFT8 737 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 NUP133Q8WUM0 1156 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 MAP3K14Q99558 947 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 GDF15Q99988 308 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 SPC25Q9HBM1 224 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 PPP4R2Q9NY27 417 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 GNEQ9Y223 722 aaKnown RBP20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 ATP11BQ9Y2G3 1177 aa20.79■□□□□ 0.92
TRAPPC9-211ENST00000521700 A0A1W2PQ45 241 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 A0A1W2PQY0 241 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 PTGS1P23219 599 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 NKX3-2P78367 333 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 TSGA10IPQ3SY00 556 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 TRIM60Q495X7 471 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 C1orf53Q5VUE5 145 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 NOL8Q76FK4 1167 aaKnown RBP20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 HOMER1Q86YM7 354 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 MCF2L2Q86YR7 1114 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 SYTL5Q8TDW5 730 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 PIGSQ96S52 555 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 MYL10Q9BUA6 226 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 LRRC2Q9BYS8 371 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 COL20A1Q9P218 1284 aa20.78■□□□□ 0.92
TRAPPC9-211ENST00000521700 MOXD2PA6NHM9 499 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 DDAH1O94760 285 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 EDNRBP24530 442 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 LIFRP42702 1097 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 GNASQ5JWF2 1037 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 ERICH6BQ5W0A0 696 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 NFXL1Q6ZNB6 911 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 PCSK9Q8NBP7 692 aaKnown RBP20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 NEK1Q96PY6 1258 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 TAAR1Q96RJ0 339 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 PCDHA1Q9Y5I3 950 aa20.77■□□□□ 0.92
TRAPPC9-211ENST00000521700 RBM47A0AV96 593 aaKnown RBP20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 CCDC69A6NI79 296 aa20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 OPLAHO14841 1288 aa20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 DYNC1LI2O43237 492 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 ASGR1P07306 291 aa20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 MAGEA10P43363 369 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 BEX3Q00994 111 aa20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 PDE4DQ08499 809 aa20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 TRIOBPQ9H2D6 2365 aa20.76■□□□□ 0.91
TRAPPC9-211ENST00000521700 PNMA6FA0A0J9YX94 578 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 CFBP00751 764 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 BMP8BP34820 402 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 EXOSC10Q01780 885 aaKnown RBP20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 TLE2Q04725 743 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 ADCK5Q3MIX3 580 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 TLK2Q86UE8 772 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 MPHOSPH6Q99547 160 aaKnown RBP20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 WDR11Q9BZH6 1224 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 AP5M1Q9H0R1 490 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 STARD7Q9NQZ5 370 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 Q9Y3F1 56 aa20.75■□□□□ 0.91
TRAPPC9-211ENST00000521700 DNAH12Q6ZR08 3092 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 B4DLN1 442 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 CENPBP07199 599 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 RXRAP19793 462 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 KIF5BP33176 963 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 MRPL12P52815 198 aaKnown RBP20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 GHRHRQ02643 423 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 DUSP28Q4G0W2 176 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 NSUN6Q8TEA1 469 aaKnown RBP20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 PIBF1Q8WXW3 757 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 RMDN3Q96TC7 470 aa20.74■□□□□ 0.91
TRAPPC9-211ENST00000521700 SMARCA1P28370 1054 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 FXR1P51114 621 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 HSD17B4P51659 736 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 TRAF1Q13077 416 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 DHX32Q7L7V1 743 aaKnown RBP20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 SGMS1Q86VZ5 419 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 KCNB2Q92953 911 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 TCEANC2Q96MN5 208 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 GLT1D1Q96MS3 346 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 SPZ1Q9BXG8 430 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 SLC12A7Q9Y666 1083 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 ELP1O95163 1332 aa20.73■□□□□ 0.91
TRAPPC9-211ENST00000521700 PLEKHA8P1O95397 391 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 CALM1P0DP23 149 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 CALM2P0DP24 149 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 CALM3P0DP25 149 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms