RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 CDK7P50613 346 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 CNTN2Q02246 1040 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 KCTD2Q14681 263 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 MAMDC4Q6UXC1 1216 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 LRRC47Q8N1G4 583 aaKnown RBP13.27□□□□□ -0.29
CSMD1-210ENST00000521646 CHMP4CQ96CF2 233 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 CEP95Q96GE4 821 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.29
CSMD1-210ENST00000521646 SLF1Q9BQI6 1058 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.27□□□□□ -0.29
CSMD1-210ENST00000521646 NYAP2Q9P242 653 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 NRBP1Q9UHY1 535 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 DDX19BQ9UMR2 479 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 TRANK1O15050 2925 aa13.27□□□□□ -0.29
CSMD1-210ENST00000521646 ZNF536O15090 1300 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 UMODL1Q5DID0 1318 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 RASIP1Q5U651 963 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 CPXCR1Q8N123 301 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 GBF1Q92538 1859 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 PURBQ96QR8 312 aaKnown RBP13.26□□□□□ -0.29
CSMD1-210ENST00000521646 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 SH2D4AQ9H788 454 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 SLC38A10Q9HBR0 1119 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 GOPCQ9HD26 462 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
CSMD1-210ENST00000521646 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
CSMD1-210ENST00000521646 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
CSMD1-210ENST00000521646 ZHX1Q9UKY1 873 aaPredicted RBP13.26□□□□□ -0.29
CSMD1-210ENST00000521646 GRIN2DO15399 1336 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 MINDY4BA8MYZ0 360 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 GPAA1O43292 621 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 HMMRO75330 724 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 SLC19A1P41440 591 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 SNAP25P60880 206 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 RNF180Q86T96 592 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 LRRCC1Q9C099 1032 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
CSMD1-210ENST00000521646 UPF3AQ9H1J1 476 aaKnown RBP13.25□□□□□ -0.29
CSMD1-210ENST00000521646 TMEM39AQ9NV64 488 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 SLC5A4Q9NY91 659 aa13.25□□□□□ -0.29
CSMD1-210ENST00000521646 GFRA3O60609 400 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 ASGR1P07306 291 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 ACRP10323 421 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 CSF2RAP15509 400 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 RAG1P15918 1043 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
CSMD1-210ENST00000521646 BEX3Q00994 111 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 FPGSQ05932 587 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 ACVR2BQ13705 512 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 CCDC144BQ3MJ40 725 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 TMEM240Q5SV17 173 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 ARMCX2Q7L311 632 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 MKL1Q969V6 931 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 KIFC2Q96AC6 838 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 TSEN34Q9BSV6 310 aaKnown RBP13.24□□□□□ -0.29
CSMD1-210ENST00000521646 REPIN1Q9BWE0 567 aaKnown RBP13.24□□□□□ -0.29
CSMD1-210ENST00000521646 STARD7Q9NQZ5 370 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 ECHDC1Q9NTX5 307 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
CSMD1-210ENST00000521646 CXXC1Q9P0U4 656 aaPredicted RBP13.24□□□□□ -0.29
CSMD1-210ENST00000521646 PLIN4Q96Q06 1357 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
CSMD1-210ENST00000521646 NMT2O60551 498 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 DUSP11O75319 330 aaKnown RBP13.23□□□□□ -0.29
CSMD1-210ENST00000521646 TIMP1P01033 207 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 FOSL2P15408 326 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
CSMD1-210ENST00000521646 ADGRE1Q14246 886 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 FAM133AQ8N9E0 248 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 PRPF38AQ8NAV1 312 aaKnown RBP13.23□□□□□ -0.29
CSMD1-210ENST00000521646 PI4K2BQ8TCG2 481 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 APPBP2Q92624 585 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 THAP11Q96EK4 314 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 TOX2Q96NM4 488 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 PBX4Q9BYU1 374 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 PDGFCQ9NRA1 345 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
CSMD1-210ENST00000521646 CD4P01730 458 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
CSMD1-210ENST00000521646 GJA9P57773 515 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 BRICD5Q6PL45 260 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 PPP1R12CQ9BZL4 782 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
CSMD1-210ENST00000521646 IL17RBQ9NRM6 502 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 FAM184BQ9ULE4 1060 aa13.22□□□□□ -0.29
CSMD1-210ENST00000521646 GNEQ9Y223 722 aaKnown RBP13.22□□□□□ -0.29
CSMD1-210ENST00000521646 MYO9BQ13459 2157 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 BDP1A6H8Y1 2624 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 MOXD2PA6NHM9 499 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms