RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
MRPS28-208ENST00000521605 HLA-CQ95604 372 aa12.64□□□□□ -0.39
MRPS28-208ENST00000521605 HIPK3Q9H422 1215 aa12.64□□□□□ -0.39
MRPS28-208ENST00000521605 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
MRPS28-208ENST00000521605 PCDHA11Q9Y5I1 949 aa12.64□□□□□ -0.39
MRPS28-208ENST00000521605 EPOPA6NHQ4 379 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 PI4K2BG5E9Z4 385 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 ZNF213O14771 459 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-208ENST00000521605 CA3P07451 260 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 EVX2Q03828 476 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 STOX1Q6ZVD7 989 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 MAGEB6Q8N7X4 407 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
MRPS28-208ENST00000521605 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 CNNM2Q9H8M5 875 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 TPCN1Q9ULQ1 816 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 SMC3Q9UQE7 1217 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 TAF6LQ9Y6J9 622 aa12.63□□□□□ -0.39
MRPS28-208ENST00000521605 COL11A1P12107 1806 aaPredicted RBP12.62□□□□□ -0.39
MRPS28-208ENST00000521605 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
MRPS28-208ENST00000521605 ADCY6O43306 1168 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 PFKFB2O60825 505 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 DUSP11O75319 330 aaKnown RBP12.62□□□□□ -0.39
MRPS28-208ENST00000521605 ATP2A2P16615 1042 aaKnown RBP12.62□□□□□ -0.39
MRPS28-208ENST00000521605 MCM5P33992 734 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 ME3Q16798 604 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 GNASQ5JWF2 1037 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
MRPS28-208ENST00000521605 ARNTL2Q8WYA1 636 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 GTF3C6Q969F1 213 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 DIS3Q9Y2L1 958 aaKnown RBP12.62□□□□□ -0.39
MRPS28-208ENST00000521605 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
MRPS28-208ENST00000521605 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 MBD4O95243 580 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 BAG4O95429 457 aaKnown RBP12.61□□□□□ -0.39
MRPS28-208ENST00000521605 SNAI1O95863 264 aaPredicted RBP12.61□□□□□ -0.39
MRPS28-208ENST00000521605 CD4P01730 458 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 RCAN1P53805 252 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 NHLH1Q02575 133 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 TRDNQ13061 729 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 TMEM67Q5HYA8 995 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 RIOX2Q8IUF8 465 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 SCLYQ96I15 445 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 RIOK1Q9BRS2 568 aaKnown RBP12.61□□□□□ -0.39
MRPS28-208ENST00000521605 RNF41Q9H4P4 317 aaPredicted RBP12.61□□□□□ -0.39
MRPS28-208ENST00000521605 FBXO28Q9NVF7 368 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
MRPS28-208ENST00000521605 GSG1L2A8MUP6 293 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 RAD21O60216 631 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 CPA1P15085 419 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 POU3F3P20264 500 aaPredicted RBP12.6□□□□□ -0.39
MRPS28-208ENST00000521605 CST5P28325 142 aaPredicted RBP12.6□□□□□ -0.39
MRPS28-208ENST00000521605 STAT3P40763 770 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 HMGN5P82970 282 aaKnown RBP12.6□□□□□ -0.39
MRPS28-208ENST00000521605 BEX3Q00994 111 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 Q6ZUG5 572 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
MRPS28-208ENST00000521605 SMARCC2Q8TAQ2 1214 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 WNT8AQ9H1J5 351 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 PARP14Q460N5 1801 aa12.6□□□□□ -0.39
MRPS28-208ENST00000521605 NID2Q14112 1375 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 MAGEB6P1A0A0J9YX57 407 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 STX6O43752 255 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 DHX16O60231 1041 aaKnown RBP12.59□□□□□ -0.39
MRPS28-208ENST00000521605 FGRP09769 529 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
MRPS28-208ENST00000521605 GJA9P57773 515 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 ST3GAL1Q11201 340 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 ACVR2BQ13705 512 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 CCDC144BQ3MJ40 725 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 CXCL17Q6UXB2 119 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 SGMS1Q86VZ5 419 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 DDX11Q96FC9 970 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
MRPS28-208ENST00000521605 KRT23Q9C075 422 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 NAPBQ9H115 298 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 TRPV6Q9H1D0 765 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 VCPKMTQ9H867 229 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
MRPS28-208ENST00000521605 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 ISY1Q9ULR0 285 aaKnown RBP12.59□□□□□ -0.39
MRPS28-208ENST00000521605 WDFY4Q6ZS81 3184 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
MRPS28-208ENST00000521605 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
MRPS28-208ENST00000521605 ARHGEF15O94989 841 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 LARGE1O95461 756 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 ZSCAN22P10073 491 aaPredicted RBP12.58□□□□□ -0.4
MRPS28-208ENST00000521605 SYT1P21579 422 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 LIFRP42702 1097 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms