RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 DPY19L1Q2PZI1 675 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 MBLAC2Q68D91 279 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 CDCA2Q69YH5 1023 aaPredicted RBP4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 PAOXQ6QHF9 649 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 CRTC3Q6UUV7 619 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 ANKLE2Q86XL3 938 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 PPM1KQ8N3J5 372 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 FBXL6Q8N531 539 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 ZNF655Q8N720 491 aaPredicted RBP4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 TMEM52Q8NDY8 209 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 ASPSCR1Q9BZE9 553 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 PRDM5Q9NQX1 630 aaPredicted RBP4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 SEMA3GQ9NS98 782 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 SLC52A1Q9NWF4 448 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 TPX2Q9ULW0 747 aaKnown RBP4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 SF3B6Q9Y3B4 125 aaKnown RBP4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 PCDHA9Q9Y5H5 950 aa4.83□□□□□ -1.64
HMGN1P28-201ENST00000521340 C2orf71A6NGG8 1288 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 BTBD11A6QL63 1104 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 ALG1L2C9J202 215 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 TRAF5O00463 557 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 GPR39O43194 453 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 CBX7O95931 251 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 FOSL1P15407 271 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 IGFALSP35858 605 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 SKOR2Q2VWA4 1001 aaPredicted RBP4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 CREB3L3Q68CJ9 461 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 RCSD1Q6JBY9 416 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 ZCCHC8Q6NZY4 707 aaKnown RBP4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 DDX46Q7L014 1031 aaKnown RBP4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 ZNF765Q7L2R6 523 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 TSPYL5Q86VY4 417 aaPredicted RBP4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 KIF18BQ86Y91 864 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 SPACA3Q8IXA5 215 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 ABI1Q8IZP0 508 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 LINC00116Q8NCU8 138 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 PCDH19Q8TAB3 1148 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 MAGEB10Q96LZ2 347 aaPredicted RBP4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 IPO9Q96P70 1041 aaKnown RBP4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 GPR27Q9NS67 375 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 ATG3Q9NT62 314 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 FAN1Q9Y2M0 1017 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 RNF114Q9Y508 228 aa4.82□□□□□ -1.64
HMGN1P28-201ENST00000521340 TMEM82A0PJX8 343 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 STXBP3O00186 592 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 CBX4O00257 560 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 NEMP1O14524 444 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 JMJD7P0C870 316 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 ID4P47928 161 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 GPR85P60893 370 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 POU4F1Q01851 419 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 DSG1Q02413 1049 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 MCL1Q07820 350 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 STAT4Q14765 748 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 NFE2Q16621 373 aaPredicted RBP4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 INF2Q27J81 1249 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 USP53Q70EK8 1073 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 AHI1Q8N157 1196 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 MFSD4AQ8N468 514 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 RCBTB1Q8NDN9 531 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 LEO1Q8WVC0 666 aaPredicted RBP4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 MMP19Q99542 508 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 ZFYVE21Q9BQ24 234 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 OSBPL1AQ9BXW6 950 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 CRTAC1Q9NQ79 661 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 CCDC39Q9UFE4 941 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 KCNH3Q9ULD8 1083 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 G3BP2Q9UN86 482 aaKnown RBP4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 PCDHA8Q9Y5H6 950 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 EID1Q9Y6B2 187 aa4.81□□□□□ -1.64
HMGN1P28-201ENST00000521340 MEIS1O00470 390 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 FGF10O15520 208 aaPredicted RBP4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 GLRX3O76003 335 aaKnown RBP4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 F2P00734 622 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 PLS3P13797 630 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 CNGA1P29973 690 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 KCNJ6P48051 423 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 MTMR1Q13613 665 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 INAVAQ3KP66 663 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 E4F1Q66K89 784 aaPredicted RBP4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 LBX2Q6XYB7 198 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 NECAB2Q7Z6G3 386 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 DPF3Q92784 378 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 TBC1D32Q96NH3 1257 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 PHF20Q9BVI0 1012 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 MKNK2Q9HBH9 465 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 GTF2IRD1Q9UHL9 959 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 FBXL7Q9UJT9 491 aa4.8□□□□□ -1.64
HMGN1P28-201ENST00000521340 K7ESF4 209 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 AQP7O14520 342 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 OPA1O60313 960 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 KPNA6O60684 536 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 PPP1R11O60927 126 aaPredicted RBP4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 KATNA1O75449 491 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 ALDH1L1O75891 902 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 ESR1P03372 595 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 PRNPP04156 253 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 S100BP04271 92 aaPredicted RBP4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 CD3EP07766 207 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms