RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
CLN8-205ENST00000520991 ARVCFO00192 962 aa18.51■□□□□ 0.55
CLN8-205ENST00000520991 DYNC1LI2O43237 492 aaPredicted RBP18.51■□□□□ 0.55
CLN8-205ENST00000520991 FPGSQ05932 587 aa18.51■□□□□ 0.55
CLN8-205ENST00000520991 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
CLN8-205ENST00000520991 ASPRV1Q53RT3 343 aa18.51■□□□□ 0.55
CLN8-205ENST00000520991 CXCL17Q6UXB2 119 aa18.51■□□□□ 0.55
CLN8-205ENST00000520991 TLR3O15455 904 aaKnown RBP18.5■□□□□ 0.55
CLN8-205ENST00000520991 DHX16O60231 1041 aaKnown RBP18.5■□□□□ 0.55
CLN8-205ENST00000520991 CABYRO75952 493 aa18.5■□□□□ 0.55
CLN8-205ENST00000520991 PARP1P09874 1014 aaKnown RBP18.5■□□□□ 0.55
CLN8-205ENST00000520991 PTGS1P23219 599 aa18.5■□□□□ 0.55
CLN8-205ENST00000520991 CDK7P50613 346 aa18.5■□□□□ 0.55
CLN8-205ENST00000520991 RPS6P62753 249 aaKnown RBP18.5■□□□□ 0.55
CLN8-205ENST00000520991 CDC37Q16543 378 aaPredicted RBP18.5■□□□□ 0.55
CLN8-205ENST00000520991 IFIT1BQ5T764 474 aaKnown RBP18.5■□□□□ 0.55
CLN8-205ENST00000520991 Q9Y3F1 56 aa18.5■□□□□ 0.55
CLN8-205ENST00000520991 PDE4DQ08499 809 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 TRDNQ13061 729 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 ADGRF4Q8IZF3 695 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 RNPC3Q96LT9 517 aaKnown RBP18.49■□□□□ 0.55
CLN8-205ENST00000520991 MTMR10Q9NXD2 777 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 TBX21Q9UL17 535 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 B4DLN1 442 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 TIMP1P01033 207 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 CHMLP26374 656 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 MRPL12P52815 198 aaKnown RBP18.49■□□□□ 0.55
CLN8-205ENST00000520991 DUSP28Q4G0W2 176 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 TMEM63BQ5T3F8 832 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 FAM109BQ6ICB4 259 aaPredicted RBP18.49■□□□□ 0.55
CLN8-205ENST00000520991 DNERQ8NFT8 737 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 WDR11Q9BZH6 1224 aa18.49■□□□□ 0.55
CLN8-205ENST00000520991 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
CLN8-205ENST00000520991 ABCB11O95342 1321 aa18.48■□□□□ 0.55
CLN8-205ENST00000520991 EPHB4P54760 987 aa18.48■□□□□ 0.55
CLN8-205ENST00000520991 ZNF697Q5TEC3 545 aa18.48■□□□□ 0.55
CLN8-205ENST00000520991 FAM126BQ8IXS8 530 aa18.48■□□□□ 0.55
CLN8-205ENST00000520991 VAT1LQ9HCJ6 419 aa18.48■□□□□ 0.55
CLN8-205ENST00000520991 ITGA7Q13683 1181 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 PPP2R5BQ15173 497 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 MFSD5Q6N075 450 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 CYB5R4Q7L1T6 521 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 FBXO11Q86XK2 927 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 RGS22Q8NE09 1264 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 FAM161BQ96MY7 647 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 STXBP5LQ9Y2K9 1186 aa18.47■□□□□ 0.55
CLN8-205ENST00000520991 EDNRBP24530 442 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 CPT1AP50416 773 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 SMAD3P84022 425 aaKnown RBP18.46■□□□□ 0.55
CLN8-205ENST00000520991 PTH1RQ03431 593 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 PPIGQ13427 754 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLN8-205ENST00000520991 QRICH1Q2TAL8 776 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 RALYLQ86SE5 291 aaKnown RBP18.46■□□□□ 0.55
CLN8-205ENST00000520991 MCF2L2Q86YR7 1114 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 SLC43A3Q8NBI5 491 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 OR6J1Q8NGC5 347 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 SCFD2Q8WU76 684 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 PPP1R12CQ9BZL4 782 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 JMJD4Q9H9V9 463 aa18.46■□□□□ 0.55
CLN8-205ENST00000520991 MRPL11Q9Y3B7 192 aaKnown RBP18.46■□□□□ 0.55
CLN8-205ENST00000520991 RBM47A0AV96 593 aaKnown RBP18.45■□□□□ 0.54
CLN8-205ENST00000520991 ERICH2A1L162 156 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 NKRFO15226 690 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLN8-205ENST00000520991 CYP21A2P08686 494 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 PSMC6P62333 389 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 SEC23AQ15436 765 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 BRDTQ58F21 947 aaPredicted RBP18.45■□□□□ 0.54
CLN8-205ENST00000520991 TMEM199Q8N511 208 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 SEZ6LQ9BYH1 1024 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 MAF1Q9H063 256 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 POLR3EQ9NVU0 708 aa18.45■□□□□ 0.54
CLN8-205ENST00000520991 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
CLN8-205ENST00000520991 IFIT3O14879 490 aaKnown RBP18.44■□□□□ 0.54
CLN8-205ENST00000520991 SGSM2O43147 1006 aa18.44■□□□□ 0.54
CLN8-205ENST00000520991 CD4P01730 458 aa18.44■□□□□ 0.54
CLN8-205ENST00000520991 MYL3P08590 195 aa18.44■□□□□ 0.54
CLN8-205ENST00000520991 STAG2Q8N3U4 1231 aa18.44■□□□□ 0.54
CLN8-205ENST00000520991 GPHNQ9NQX3 736 aaPredicted RBP18.44■□□□□ 0.54
CLN8-205ENST00000520991 GRIN2DO15399 1336 aa18.44■□□□□ 0.54
CLN8-205ENST00000520991 CSF2RAP15509 400 aa18.43■□□□□ 0.54
CLN8-205ENST00000520991 TTLL4Q14679 1199 aa18.43■□□□□ 0.54
CLN8-205ENST00000520991 SART3Q15020 963 aaKnown RBP18.43■□□□□ 0.54
CLN8-205ENST00000520991 NCOA7Q8NI08 942 aa18.43■□□□□ 0.54
CLN8-205ENST00000520991 SYTL5Q8TDW5 730 aaPredicted RBP18.43■□□□□ 0.54
CLN8-205ENST00000520991 NSUN6Q8TEA1 469 aaKnown RBP18.43■□□□□ 0.54
CLN8-205ENST00000520991 TBC1D5Q92609 795 aa18.43■□□□□ 0.54
CLN8-205ENST00000520991 AMNQ9BXJ7 453 aa18.43■□□□□ 0.54
CLN8-205ENST00000520991 HIPK3Q9H422 1215 aa18.43■□□□□ 0.54
CLN8-205ENST00000520991 MYH6P13533 1939 aa18.42■□□□□ 0.54
CLN8-205ENST00000520991 TXNP10599 105 aaKnown RBP18.42■□□□□ 0.54
CLN8-205ENST00000520991 CYP2C18P33260 490 aa18.42■□□□□ 0.54
CLN8-205ENST00000520991 PURAQ00577 322 aaKnown RBP18.42■□□□□ 0.54
CLN8-205ENST00000520991 GUCD1Q96NT3 240 aa18.42■□□□□ 0.54
CLN8-205ENST00000520991 TAAR1Q96RJ0 339 aa18.42■□□□□ 0.54
CLN8-205ENST00000520991 RMDN3Q96TC7 470 aa18.42■□□□□ 0.54
CLN8-205ENST00000520991 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.545e-8■■■■□ 21.4
CLN8-205ENST00000520991 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
CLN8-205ENST00000520991 MAD2L2Q9UI95 211 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms