RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 PPP2R3CQ969Q6 453 aa13.21□□□□□ -0.29
PCDHGB6-201ENST00000520790 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
PCDHGB6-201ENST00000520790 SENP6Q9GZR1 1112 aaPredicted RBP13.21□□□□□ -0.29
PCDHGB6-201ENST00000520790 ZSCAN22P10073 491 aaPredicted RBP13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 KCNA4P22459 653 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 PPATQ06203 517 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 MAP4K1Q92918 833 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.3
PCDHGB6-201ENST00000520790 MYPNQ86TC9 1320 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 PSAPP07602 524 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 FKBP1BP68106 108 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 TNFAIP2Q03169 654 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 DEFB118Q96PH6 123 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 RMND1Q9NWS8 449 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 FMR1Q06787 632 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 MYOCDQ8IZQ8 938 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 TBC1D2Q9BYX2 928 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 LARSQ9P2J5 1176 aaKnown RBP13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 EXOC3O60645 756 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 CABP7Q86V35 215 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 ZNF397Q8NF99 534 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 CD19P15391 556 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 HSPA4P34932 840 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 STX17P56962 302 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 RNF34Q969K3 372 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 MMS19Q96T76 1030 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 HTATIP2Q9BUP3 242 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 ASCC2Q9H1I8 757 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 PRR12Q9ULL5 1215 aa13.2□□□□□ -0.3
PCDHGB6-201ENST00000520790 ASTN2O75129 1339 aaPredicted RBP13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 C1QTNF8P60827 252 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 ADGRF4Q8IZF3 695 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 MEIS1O00470 390 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 PRPF6O94906 941 aaKnown RBP13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 LETM1O95202 739 aaPredicted RBP13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 CCDC155Q8N6L0 562 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 PIDD1Q9HB75 910 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 CYP2C19P33261 490 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 ENAHQ8N8S7 591 aaPredicted RBP13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
PCDHGB6-201ENST00000520790 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 WDR44Q5JSH3 913 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 NYAP2Q9P242 653 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 EVI5O60447 810 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 VCAM1P19320 739 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 RFX5P48382 616 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 ARID5AQ03989 594 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 DEFB128Q7Z7B8 93 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 ZFPM1Q8IX07 1006 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 KCNG1Q9UIX4 513 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 DNA2P51530 1060 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 FAM205AQ6ZU69 1335 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 ACTN1P12814 892 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 LBX1P52954 281 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 DMP1Q13316 513 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 GPBP1Q86WP2 473 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 AK9Q5TCS8 1911 aa13.18□□□□□ -0.3
PCDHGB6-201ENST00000520790 RPAP1Q9BWH6 1393 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 CETN2P41208 172 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 ODR4Q5SWX8 454 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 EXOC8Q8IYI6 725 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 CEP83Q9Y592 693 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 NR3C2P08235 984 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 OR52Z1P0C646 297 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 FLT3LGP49771 235 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 TMEM62Q0P6H9 643 aa13.17□□□□□ -0.3
PCDHGB6-201ENST00000520790 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms