RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 ANO3Q9BYT9 981 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 SPATC1LQ9H0A9 340 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 POLR3EQ9NVU0 708 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 TMEM260Q9NX78 707 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 FBXO40Q9UH90 709 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 RABGAP1Q9Y3P9 1069 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 RASSF10A6NK89 507 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 FAM155AB1AL88 458 aaPredicted RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 NFIBO00712 420 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 MEIS2O14770 477 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 ADAMTS3O15072 1205 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 MCM4P33991 863 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 NASPP49321 788 aaPredicted RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 HSD17B4P51659 736 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 CCNA1P78396 465 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 CEBPZQ03701 1054 aaKnown RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 NOGQ13253 232 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 SF3A1Q15459 793 aaKnown RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 TAF1CQ15572 869 aaPredicted RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 CYP4F22Q6NT55 531 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 NSMFQ6X4W1 530 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 NEK8Q86SG6 692 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 RIOX2Q8IUF8 465 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 JMYQ8N9B5 988 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 KCNG4Q8TDN1 519 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 TBCKQ8TEA7 893 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 CLEC4DQ8WXI8 215 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 PGBD1Q96JS3 809 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 NAP1L4Q99733 375 aaKnown RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 MAF1Q9H063 256 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 GDPD2Q9HCC8 539 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 MAP3K20Q9NYL2 800 aaKnown RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 RTEL1Q9NZ71 1219 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 BTBD7Q9P203 1132 aa10.21□□□□□ -0.77
CSMD1-208ENST00000520561 TFIP11Q9UBB9 837 aaKnown RBP10.21□□□□□ -0.77
CSMD1-208ENST00000520561 IGF2BP3O00425 579 aaKnown RBP eCLIP10.2□□□□□ -0.78
CSMD1-208ENST00000520561 PFASO15067 1338 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 CNMDO75829 334 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 ELP1O95163 1332 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 HOXA13P31271 388 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-208ENST00000520561 ERVK-9P63128 1117 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 ERVK-24P63145 666 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 GHRHRQ02643 423 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 ORC2Q13416 577 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-208ENST00000520561 NFKBIBQ15653 356 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 LETM2Q2VYF4 491 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 DEFB115Q30KQ5 88 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
CSMD1-208ENST00000520561 SLC30A10Q6XR72 485 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 RNF207Q6ZRF8 634 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 FCHSD1Q86WN1 690 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 NCAPG2Q86XI2 1143 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 TMEM87AQ8NBN3 555 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 SHCBP1Q8NEM2 672 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 GPRC5AQ8NFJ5 357 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 LEO1Q8WVC0 666 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-208ENST00000520561 CAPNS2Q96L46 248 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 PTPN18Q99952 460 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 FTOQ9C0B1 505 aaKnown RBP eCLIP10.2□□□□□ -0.78
CSMD1-208ENST00000520561 TXNRD2Q9NNW7 524 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 RIPK3Q9Y572 518 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 CLIC4Q9Y696 253 aa10.2□□□□□ -0.78
CSMD1-208ENST00000520561 GOLGA6L4A6NEF3 574 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 SPTLC2O15270 562 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 CCNT1O60563 726 aaKnown RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 GCFC2P16383 781 aaKnown RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 ERCC3P19447 782 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 MCM7P33993 719 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 SREBF1P36956 1147 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 TOB1P50616 345 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 RPS6P62753 249 aaKnown RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 NBR1Q14596 966 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 ZNF174Q15697 407 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 FAM110CQ1W6H9 321 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 WDR78Q5VTH9 848 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 CCAR1Q8IX12 1150 aaKnown RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 ANKRD13CQ8N6S4 541 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 LINC00301Q8NCQ3 95 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 MOV10L1Q9BXT6 1211 aaKnown RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 MROH8Q9H579 483 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 ZFYVE28Q9HCC9 887 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.19□□□□□ -0.78
CSMD1-208ENST00000520561 RBPJLQ9UBG7 517 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 MORF4L1Q9UBU8 362 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 PCDHB6Q9Y5E3 794 aa10.19□□□□□ -0.78
CSMD1-208ENST00000520561 NEMFO60524 1076 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 PEX10O60683 326 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 PPP6R2O75170 966 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 PRPF40AO75400 957 aaKnown RBP10.18□□□□□ -0.78
CSMD1-208ENST00000520561 ALDH1A1P00352 501 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 ME1P48163 572 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 ARHGAP4P98171 946 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 SLC39A14Q15043 492 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 MOXD1Q6UVY6 613 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 ANKRD35Q8N283 1001 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms