RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 STAG1Q8WVM7 1258 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 CCDC51Q96ER9 411 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 TRIM47Q96LD4 638 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 UBAC1Q9BSL1 405 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 TMX1Q9H3N1 280 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 GPHNQ9NQX3 736 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 FAM53CQ9NYF3 392 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 ZHX1Q9UKY1 873 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 MYPNQ86TC9 1320 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 URI1O94763 535 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 TUBBP07437 444 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 CCDC175P0C221 793 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 PTPREP23469 700 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 PRDX5P30044 214 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 GRK4P32298 578 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 PPATQ06203 517 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 SPAG1Q07617 926 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 TRIM14Q14142 442 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 CDC42EP5Q6NZY7 148 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 HHIPL2Q6UWX4 724 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 C17orf99Q6UX52 265 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 GADL1Q6ZQY3 521 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 METTL16Q86W50 562 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 IFNL3Q8IZI9 196 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 SPATA5Q8NB90 893 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 GOLGA1Q92805 767 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 ERCC4Q92889 916 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 FERMT2Q96AC1 680 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 SHISA4Q96DD7 197 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 PANX2Q96RD6 677 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 STRBPQ96SI9 672 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 RNF26Q9BY78 433 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 NBPF3Q9H094 633 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 RNF208Q9H0X6 261 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 PIH1D3Q9NQM4 214 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 USP40Q9NVE5 1235 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 RBM28Q9NW13 759 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 RAI14Q9P0K7 980 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 CALCOCO1Q9P1Z2 691 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 SRRDQ9UH36 339 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 MAN1B1Q9UKM7 699 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 PPP2R2CQ9Y2T4 447 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 SYNRGQ9UMZ2 1314 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 SZT2Q5T011 3432 aa9.75□□□□□ -0.85
CTNNA1-223ENST00000520520 A0A087WWV3 80 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 TCRBV5S4A2TA0A5A2 114 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 TRIM75PA6NK02 468 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 KIF5CO60282 957 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 TADA3O75528 432 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 MBD4O95243 580 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 LDHBP07195 334 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 SLURP2P0DP57 97 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 CCL5P13501 91 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 HOXD10P28358 340 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 PRKCZQ05513 592 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 TBX2Q13207 712 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 MORC3Q14149 939 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 TERF2Q15554 542 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 NTRK3Q16288 839 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 ANKRD23Q86SG2 305 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 RAB11FIP4Q86YS3 637 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 CNGA4Q8IV77 575 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 ZFPM1Q8IX07 1006 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 WDR66Q8TBY9 1149 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 IGDCC4Q8TDY8 1250 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 FAM151AQ8WW52 585 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 ESR2Q92731 530 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 PHKBQ93100 1093 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 GNL3LQ9NVN8 582 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 AATFQ9NY61 560 aaKnown RBP eCLIP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 FBXO2Q9UK22 296 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 NFE2L3Q9Y4A8 694 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 PCDHA5Q9Y5H7 936 aa9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 SRPRBQ9Y5M8 271 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 V9GYY5 206 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-223ENST00000520520 MAST2Q6P0Q8 1798 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 AKR1B15C9JRZ8 316 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 RANBP6O60518 1105 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 ERLIN1O75477 346 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 ATP1A3P13637 1013 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 FGFR2P21802 821 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 CDC27P30260 824 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 KRT2P35908 639 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 GNG11P61952 73 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 PPP2R3AQ06190 1150 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 PICALMQ13492 652 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 ERCC6LQ2NKX8 1250 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 LONRF3Q496Y0 759 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 CCDC84Q86UT8 332 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 TXLNBQ8N3L3 684 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 MAGEB6Q8N7X4 407 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 PDILTQ8N807 584 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 CEP112Q8N8E3 955 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms