RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 RAB30Q15771 203 aa23.61■■□□□ 1.37
HDAC2-207ENST00000520170 BTNL9Q6UXG8 535 aa23.61■■□□□ 1.37
HDAC2-207ENST00000520170 MORC4Q8TE76 937 aa23.61■■□□□ 1.37
HDAC2-207ENST00000520170 FAM227BQ96M60 508 aa23.61■■□□□ 1.37
HDAC2-207ENST00000520170 TMEM47Q9BQJ4 181 aa23.61■■□□□ 1.37
HDAC2-207ENST00000520170 SEZ6LQ9BYH1 1024 aa23.61■■□□□ 1.37
HDAC2-207ENST00000520170 PRDM6Q9NQX0 595 aa23.61■■□□□ 1.37
HDAC2-207ENST00000520170 FGRP09769 529 aa23.6■■□□□ 1.37
HDAC2-207ENST00000520170 DUSP28Q4G0W2 176 aa23.6■■□□□ 1.37
HDAC2-207ENST00000520170 WDR11Q9BZH6 1224 aa23.6■■□□□ 1.37
HDAC2-207ENST00000520170 WNT8AQ9H1J5 351 aa23.6■■□□□ 1.37
HDAC2-207ENST00000520170 NKX2-4Q9H2Z4 354 aa23.6■■□□□ 1.37
HDAC2-207ENST00000520170 CHD7Q9P2D1 2997 aa23.59■■□□□ 1.37
HDAC2-207ENST00000520170 PDE1AP54750 535 aa23.59■■□□□ 1.37
HDAC2-207ENST00000520170 MCMDC2Q4G0Z9 681 aa23.59■■□□□ 1.37
HDAC2-207ENST00000520170 A0A0D9SFI3 127 aa23.58■■□□□ 1.37
HDAC2-207ENST00000520170 CALML3P27482 149 aa23.58■■□□□ 1.37
HDAC2-207ENST00000520170 HAND2P61296 217 aa23.58■■□□□ 1.37
HDAC2-207ENST00000520170 TJAP1Q5JTD0 557 aa23.58■■□□□ 1.37
HDAC2-207ENST00000520170 RPUSD2Q8IZ73 545 aaKnown RBP23.58■■□□□ 1.37
HDAC2-207ENST00000520170 SCLYQ96I15 445 aa23.58■■□□□ 1.37
HDAC2-207ENST00000520170 ALDH8A1Q9H2A2 487 aaPredicted RBP23.58■■□□□ 1.37
HDAC2-207ENST00000520170 SLC28A3Q9HAS3 691 aa23.58■■□□□ 1.37
HDAC2-207ENST00000520170 SCN5AQ14524 2016 aa23.58■■□□□ 1.37
HDAC2-207ENST00000520170 MYL3P08590 195 aa23.57■■□□□ 1.36
HDAC2-207ENST00000520170 IGFBP4P22692 258 aa23.57■■□□□ 1.36
HDAC2-207ENST00000520170 CCDC85BQ15834 202 aaPredicted RBP23.57■■□□□ 1.36
HDAC2-207ENST00000520170 SLC30A10Q6XR72 485 aa23.57■■□□□ 1.36
HDAC2-207ENST00000520170 CLEC4DQ8WXI8 215 aa23.57■■□□□ 1.36
HDAC2-207ENST00000520170 TCP11L1Q9NUJ3 509 aa23.57■■□□□ 1.36
HDAC2-207ENST00000520170 POLR3EQ9NVU0 708 aa23.57■■□□□ 1.36
HDAC2-207ENST00000520170 YBX2Q9Y2T7 364 aaKnown RBP23.57■■□□□ 1.36
HDAC2-207ENST00000520170 HSPD1P10809 573 aaKnown RBP23.56■■□□□ 1.36
HDAC2-207ENST00000520170 PDHBP11177 359 aa23.56■■□□□ 1.36
HDAC2-207ENST00000520170 RABGGTBP53611 331 aa23.56■■□□□ 1.36
HDAC2-207ENST00000520170 ADGRE1Q14246 886 aa23.56■■□□□ 1.36
HDAC2-207ENST00000520170 AKNAD1Q5T1N1 836 aa23.56■■□□□ 1.36
HDAC2-207ENST00000520170 RNF207Q6ZRF8 634 aa23.56■■□□□ 1.36
HDAC2-207ENST00000520170 OR6J1Q8NGC5 347 aa23.56■■□□□ 1.36
HDAC2-207ENST00000520170 GPHNQ9NQX3 736 aaPredicted RBP23.56■■□□□ 1.36
HDAC2-207ENST00000520170 TRMT13Q9NUP7 481 aaKnown RBP23.56■■□□□ 1.36
HDAC2-207ENST00000520170 SLC4A7Q9Y6M7 1214 aa23.56■■□□□ 1.36
HDAC2-207ENST00000520170 ZBBXA8MT70 800 aa23.55■■□□□ 1.36
HDAC2-207ENST00000520170 CYP2C9P11712 490 aa23.55■■□□□ 1.36
HDAC2-207ENST00000520170 CPT1AP50416 773 aa23.55■■□□□ 1.36
HDAC2-207ENST00000520170 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
HDAC2-207ENST00000520170 PURAQ00577 322 aaKnown RBP23.55■■□□□ 1.36
HDAC2-207ENST00000520170 PDE4DQ08499 809 aa23.55■■□□□ 1.36
HDAC2-207ENST00000520170 NMIQ13287 307 aaPredicted RBP23.55■■□□□ 1.36
HDAC2-207ENST00000520170 ZNF589Q86UQ0 364 aaPredicted RBP23.55■■□□□ 1.36
HDAC2-207ENST00000520170 CRBNQ96SW2 442 aa23.55■■□□□ 1.36
HDAC2-207ENST00000520170 LOC102724159A0A0B4J2E5 919 aa23.54■■□□□ 1.36
HDAC2-207ENST00000520170 RBM47A0AV96 593 aaKnown RBP23.54■■□□□ 1.36
HDAC2-207ENST00000520170 SUPT20HL2P0C7V6 817 aa23.54■■□□□ 1.36
HDAC2-207ENST00000520170 ZNF543Q08ER8 600 aa23.54■■□□□ 1.36
HDAC2-207ENST00000520170 PWP2Q15269 919 aaKnown RBP23.54■■□□□ 1.36
HDAC2-207ENST00000520170 MFSD6Q6ZSS7 791 aa23.54■■□□□ 1.36
HDAC2-207ENST00000520170 SCN10AQ9Y5Y9 1956 aa23.54■■□□□ 1.36
HDAC2-207ENST00000520170 TNKSO95271 1327 aa23.54■■□□□ 1.36
HDAC2-207ENST00000520170 TRIP12Q14669 1992 aaPredicted RBP23.53■■□□□ 1.36
HDAC2-207ENST00000520170 TRIM6-TRIM34B2RNG4 842 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 MYOGP15173 224 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 RPS6P62753 249 aaKnown RBP23.53■■□□□ 1.36
HDAC2-207ENST00000520170 FAM47CQ5HY64 1035 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 PPP1R13LQ8WUF5 828 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 VWCEQ96DN2 955 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 TTC14Q96N46 770 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 MTG1Q9BT17 334 aaPredicted RBP23.53■■□□□ 1.36
HDAC2-207ENST00000520170 PNMA2Q9UL42 364 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 REV3LO60673 3130 aa23.53■■□□□ 1.36
HDAC2-207ENST00000520170 PPP2R5BQ15173 497 aa23.52■■□□□ 1.36
HDAC2-207ENST00000520170 BRDTQ58F21 947 aaPredicted RBP23.52■■□□□ 1.36
HDAC2-207ENST00000520170 DEFB128Q7Z7B8 93 aa23.52■■□□□ 1.36
HDAC2-207ENST00000520170 RILPL2Q969X0 211 aa23.52■■□□□ 1.36
HDAC2-207ENST00000520170 MPHOSPH6Q99547 160 aaKnown RBP23.52■■□□□ 1.36
HDAC2-207ENST00000520170 THEGQ9P2T0 379 aa23.52■■□□□ 1.36
HDAC2-207ENST00000520170 MYH6P13533 1939 aa23.52■■□□□ 1.36
HDAC2-207ENST00000520170 TTLL4Q14679 1199 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 NBPF20Q3BBV1 942 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 USH1GQ495M9 461 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 PPP2R2DQ66LE6 453 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 TBC1D10CQ8IV04 446 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 SCFD2Q8WU76 684 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 ATXN2LQ8WWM7 1075 aaKnown RBP23.51■■□□□ 1.35
HDAC2-207ENST00000520170 COPS5Q92905 334 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 ZKSCAN3Q9BRR0 538 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 ZMYM6O95789 1325 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 CCDC171Q6TFL3 1326 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 MUC3AQ02505 3323 aa23.51■■□□□ 1.35
HDAC2-207ENST00000520170 GOLGA8HP0CJ92 632 aa23.5■■□□□ 1.35
HDAC2-207ENST00000520170 ATP2A2P16615 1042 aaKnown RBP23.5■■□□□ 1.35
HDAC2-207ENST00000520170 HDAC1Q13547 482 aaPredicted RBP23.5■■□□□ 1.35
HDAC2-207ENST00000520170 DNERQ8NFT8 737 aa23.5■■□□□ 1.35
HDAC2-207ENST00000520170 LNPKQ9C0E8 428 aa23.5■■□□□ 1.35
HDAC2-207ENST00000520170 PCDHA11Q9Y5I1 949 aa23.5■■□□□ 1.35
HDAC2-207ENST00000520170 WDR19Q8NEZ3 1342 aa23.5■■□□□ 1.35
HDAC2-207ENST00000520170 RAD50Q92878 1312 aa23.5■■□□□ 1.35
HDAC2-207ENST00000520170 TNFRSF10AO00220 468 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 NKRFO15226 690 aaKnown RBP eCLIP23.49■■□□□ 1.35
HDAC2-207ENST00000520170 PFKMP08237 780 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms