RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
CSMD1-205ENST00000519623 DUSP28Q4G0W2 176 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
CSMD1-205ENST00000519623 ZNF697Q5TEC3 545 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 RNF207Q6ZRF8 634 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 UBA5Q9GZZ9 404 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 IL25Q9H293 177 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 CPVLQ9H3G5 476 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 WDR19Q8NEZ3 1342 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 B4E1Z4 1266 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 CALML3P27482 149 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 RPS6P62753 249 aaKnown RBP14.59□□□□□ -0.07
CSMD1-205ENST00000519623 ITGA7Q13683 1181 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 CCDC178Q5BJE1 867 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 SLC30A10Q6XR72 485 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 IQCA1Q86XH1 822 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 PNMA1Q8ND90 353 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 RNPC3Q96LT9 517 aaKnown RBP14.59□□□□□ -0.07
CSMD1-205ENST00000519623 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
CSMD1-205ENST00000519623 WDR11Q9BZH6 1224 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 TTYH1Q9H313 450 aaPredicted RBP14.59□□□□□ -0.07
CSMD1-205ENST00000519623 LAMA4Q16363 1823 aa14.59□□□□□ -0.07
CSMD1-205ENST00000519623 TLR3O15455 904 aaKnown RBP14.58□□□□□ -0.08
CSMD1-205ENST00000519623 ZEB2O60315 1214 aa14.58□□□□□ -0.08
CSMD1-205ENST00000519623 EDNRBP24530 442 aa14.58□□□□□ -0.08
CSMD1-205ENST00000519623 IMMTQ16891 758 aaKnown RBP14.58□□□□□ -0.08
CSMD1-205ENST00000519623 ENAHQ8N8S7 591 aaPredicted RBP14.58□□□□□ -0.08
CSMD1-205ENST00000519623 RGS22Q8NE09 1264 aa14.58□□□□□ -0.08
CSMD1-205ENST00000519623 CDX2Q99626 313 aaPredicted RBP14.58□□□□□ -0.08
CSMD1-205ENST00000519623 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.58□□□□□ -0.08
CSMD1-205ENST00000519623 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
CSMD1-205ENST00000519623 GSPT1P15170 499 aaKnown RBP14.57□□□□□ -0.08
CSMD1-205ENST00000519623 CSF2RAP15509 400 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 PPIGQ13427 754 aaKnown RBP eCLIP14.57□□□□□ -0.08
CSMD1-205ENST00000519623 TMEM240Q5SV17 173 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 ADGRF4Q8IZF3 695 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 DNERQ8NFT8 737 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 TBC1D5Q92609 795 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 SEZ6LQ9BYH1 1024 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 KRT23Q9C075 422 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 TRPV6Q9H1D0 765 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 KAT14Q9H8E8 782 aa14.57□□□□□ -0.08
CSMD1-205ENST00000519623 CUL9Q8IWT3 2517 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.56□□□□□ -0.08
CSMD1-205ENST00000519623 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.56□□□□□ -0.08
CSMD1-205ENST00000519623 DLL1O00548 723 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 CYP2C18P33260 490 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 PSMC6P62333 389 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 USH1GQ495M9 461 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 TTC22Q5TAA0 569 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 RASIP1Q5U651 963 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 TMEM199Q8N511 208 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 PPP1R12CQ9BZL4 782 aa14.56□□□□□ -0.08
CSMD1-205ENST00000519623 ACRP10323 421 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 PDE4DQ08499 809 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 CDC37Q16543 378 aaPredicted RBP14.55□□□□□ -0.08
CSMD1-205ENST00000519623 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 ZNF365Q70YC5 407 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 MAF1Q9H063 256 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 CNNM2Q9H8M5 875 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 JMJD4Q9H9V9 463 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 TNKSO95271 1327 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
CSMD1-205ENST00000519623 TMEM265A0A087WTH1 108 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 B4GALT4O60513 344 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 PARP1P09874 1014 aaKnown RBP14.54□□□□□ -0.08
CSMD1-205ENST00000519623 PURAQ00577 322 aaKnown RBP14.54□□□□□ -0.08
CSMD1-205ENST00000519623 SEC23AQ15436 765 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 QRICH1Q2TAL8 776 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 CYB5R4Q7L1T6 521 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 STAG2Q8N3U4 1231 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 SYTL5Q8TDW5 730 aaPredicted RBP14.54□□□□□ -0.08
CSMD1-205ENST00000519623 SCFD2Q8WU76 684 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 COPS5Q92905 334 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 TAAR1Q96RJ0 339 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 NOC4LQ9BVI4 516 aaKnown RBP14.54□□□□□ -0.08
CSMD1-205ENST00000519623 ALDH8A1Q9H2A2 487 aaPredicted RBP14.54□□□□□ -0.08
CSMD1-205ENST00000519623 HIPK3Q9H422 1215 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 IL23AQ9NPF7 189 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 COL20A1Q9P218 1284 aa14.54□□□□□ -0.08
CSMD1-205ENST00000519623 MYH6P13533 1939 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 ABCB11O95342 1321 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 A6NJR5 290 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 B4DLN1 442 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 NKRFO15226 690 aaKnown RBP eCLIP14.53□□□□□ -0.08
CSMD1-205ENST00000519623 TXNP10599 105 aaKnown RBP14.53□□□□□ -0.08
CSMD1-205ENST00000519623 CHMLP26374 656 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 CPT1AP50416 773 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 MRPL12P52815 198 aaKnown RBP14.53□□□□□ -0.08
CSMD1-205ENST00000519623 PTH1RQ03431 593 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 CCDC62Q6P9F0 684 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 OR6J1Q8NGC5 347 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 MYLIPQ8WY64 445 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 VWCEQ96DN2 955 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 MPHOSPH6Q99547 160 aaKnown RBP14.53□□□□□ -0.08
CSMD1-205ENST00000519623 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 CDH23Q9H251 3354 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 MYO9BQ13459 2157 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms