RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 SLC14A2Q15849 920 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 ZC3H12BQ5HYM0 836 aaKnown RBP9.2□□□□□ -0.94
PTPN12-213ENST00000519553 SCUBE1Q8IWY4 988 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 ZSWIM2Q8NEG5 633 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 ABHD4Q8TB40 342 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 SLC26A8Q96RN1 970 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 CDC6Q99741 560 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 RNF32Q9H0A6 362 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 GPR160Q9UJ42 338 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 MRPS23Q9Y3D9 190 aaKnown RBP9.2□□□□□ -0.94
PTPN12-213ENST00000519553 TBX22Q9Y458 520 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 NPFFR2Q9Y5X5 522 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 MRPL42Q9Y6G3 142 aaKnown RBP9.2□□□□□ -0.94
PTPN12-213ENST00000519553 TAF6LQ9Y6J9 622 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 BLACEA4D250 179 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 C7orf72A4D263 438 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 C6orf222P0C671 652 aaPredicted RBP9.19□□□□□ -0.94
PTPN12-213ENST00000519553 KCNAB2Q13303 367 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 GALNT18Q6P9A2 607 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 JAMLQ86YT9 394 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 ASIC4Q96FT7 647 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 DHRS4Q9BTZ2 278 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 ACSL6Q9UKU0 697 aa9.19□□□□□ -0.94
PTPN12-213ENST00000519553 BIN1O00499 593 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 MSL3P1P0C860 447 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 CORO7P57737 925 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 SUMO1P63165 101 aaKnown RBP9.18□□□□□ -0.94
PTPN12-213ENST00000519553 MVKQ03426 396 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 SNX17Q15036 470 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 USP53Q70EK8 1073 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 ZSWIM9Q86XI8 627 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 DIO2Q92813 273 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 TMEM260Q9NX78 707 aa9.18□□□□□ -0.94
PTPN12-213ENST00000519553 CARMIL2Q6F5E8 1435 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 LCP1P13796 627 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 JUNBP17275 347 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-213ENST00000519553 LTBRP36941 435 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 IQCEQ6IPM2 695 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 NLGN1Q8N2Q7 840 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 RCBTB1Q8NDN9 531 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 NUP43Q8NFH3 380 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 NLGN2Q8NFZ4 835 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 FBLN5Q9UBX5 448 aa9.17□□□□□ -0.94
PTPN12-213ENST00000519553 ESYT3A0FGR9 886 aa9.16□□□□□ -0.94
PTPN12-213ENST00000519553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.16□□□□□ -0.94
PTPN12-213ENST00000519553 PPP1R11O60927 126 aaPredicted RBP9.16□□□□□ -0.94
PTPN12-213ENST00000519553 PRKCAP17252 672 aa9.16□□□□□ -0.94
PTPN12-213ENST00000519553 TAL1P17542 331 aaPredicted RBP9.16□□□□□ -0.94
PTPN12-213ENST00000519553 STYK1Q6J9G0 422 aa9.16□□□□□ -0.94
PTPN12-213ENST00000519553 DPF3Q92784 378 aa9.16□□□□□ -0.94
PTPN12-213ENST00000519553 FBXL7Q9UJT9 491 aa9.16□□□□□ -0.94
PTPN12-213ENST00000519553 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
PTPN12-213ENST00000519553 ASXL2Q76L83 1435 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 GLI1P08151 1106 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 KCNMB1Q16558 191 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 KCNT2Q6UVM3 1135 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 DCAF4Q8WV16 495 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 FAM168AQ92567 244 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 MTA3Q9BTC8 594 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 CRTAC1Q9NQ79 661 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 GULP1Q9UBP9 304 aa9.15□□□□□ -0.94
PTPN12-213ENST00000519553 ZNF503-AS2A6NEH8 195 aa9.14□□□□□ -0.95
PTPN12-213ENST00000519553 NPHS1O60500 1241 aa9.14□□□□□ -0.95
PTPN12-213ENST00000519553 MSCO60682 206 aa9.14□□□□□ -0.95
PTPN12-213ENST00000519553 RSPO2Q6UXX9 243 aaPredicted RBP9.14□□□□□ -0.95
PTPN12-213ENST00000519553 NLRP10Q86W26 655 aa9.14□□□□□ -0.95
PTPN12-213ENST00000519553 SIRT2Q8IXJ6 389 aa9.14□□□□□ -0.95
PTPN12-213ENST00000519553 PHF20Q9BVI0 1012 aa9.14□□□□□ -0.95
PTPN12-213ENST00000519553 GPR27Q9NS67 375 aa9.14□□□□□ -0.95
PTPN12-213ENST00000519553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
PTPN12-213ENST00000519553 TLDC2A0PJX2 215 aa9.13□□□□□ -0.95
PTPN12-213ENST00000519553 PNLIPP16233 465 aa9.13□□□□□ -0.95
PTPN12-213ENST00000519553 MCTP1Q6DN14 999 aa9.13□□□□□ -0.95
PTPN12-213ENST00000519553 INTS4Q96HW7 963 aaKnown RBP9.13□□□□□ -0.95
PTPN12-213ENST00000519553 IPO9Q96P70 1041 aaKnown RBP9.13□□□□□ -0.95
PTPN12-213ENST00000519553 TNFRSF12AQ9NP84 129 aa9.13□□□□□ -0.95
PTPN12-213ENST00000519553 PDLIM7Q9NR12 457 aa9.13□□□□□ -0.95
PTPN12-213ENST00000519553 RWDD3Q9Y3V2 267 aa9.13□□□□□ -0.95
PTPN12-213ENST00000519553 CCDC163A0A0D9SF12 145 aa9.12□□□□□ -0.95
PTPN12-213ENST00000519553 TACR1P25103 407 aa9.12□□□□□ -0.95
PTPN12-213ENST00000519553 CYP4F8P98187 520 aa9.12□□□□□ -0.95
PTPN12-213ENST00000519553 Q8N1Y9 231 aa9.12□□□□□ -0.95
PTPN12-213ENST00000519553 PTPRN2Q92932 1015 aa9.12□□□□□ -0.95
PTPN12-213ENST00000519553 NCOA5Q9HCD5 579 aaKnown RBP9.12□□□□□ -0.95
PTPN12-213ENST00000519553 TRAF6Q9Y4K3 522 aa9.12□□□□□ -0.95
PTPN12-213ENST00000519553 TIMM13Q9Y5L4 95 aaPredicted RBP9.12□□□□□ -0.95
PTPN12-213ENST00000519553 ENPP3O14638 875 aa9.11□□□□□ -0.95
PTPN12-213ENST00000519553 ERVFRD-1P60508 538 aa9.11□□□□□ -0.95
PTPN12-213ENST00000519553 RPL11P62913 178 aaKnown RBP9.11□□□□□ -0.95
PTPN12-213ENST00000519553 TRIM61Q5EBN2 209 aa9.11□□□□□ -0.95
PTPN12-213ENST00000519553 MAMDC2Q7Z304 686 aaPredicted RBP9.11□□□□□ -0.95
PTPN12-213ENST00000519553 PLEKHO2Q8TD55 490 aa9.11□□□□□ -0.95
PTPN12-213ENST00000519553 ZFYVE21Q9BQ24 234 aa9.11□□□□□ -0.95
PTPN12-213ENST00000519553 FANCLQ9NW38 375 aa9.11□□□□□ -0.95
PTPN12-213ENST00000519553 PCDHA2Q9Y5H9 948 aa9.11□□□□□ -0.95
PTPN12-213ENST00000519553 A0A1W2PQ27 194 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 A0A1W2PQ64 194 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 A0A1W2PQC6 194 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 A0A1W2PQD8 194 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 BCL6P41182 706 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms