RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 RNF207Q6ZRF8 634 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 SKAP1Q86WV1 359 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 FBXO16Q8IX29 292 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 SLC43A3Q8NBI5 491 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 PNMA1Q8ND90 353 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 SLC17A8Q8NDX2 589 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 CLEC4DQ8WXI8 215 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 PURBQ96QR8 312 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 ZSCAN10Q96SZ4 725 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 MPHOSPH6Q99547 160 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 KRT23Q9C075 422 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 KAT14Q9H8E8 782 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 CNNM2Q9H8M5 875 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 PDGFCQ9NRA1 345 aa14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 LAMA2P24043 3122 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-206ENST00000519482 B4E1Z4 1266 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 DYNC1LI2O43237 492 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 ZNF697Q5TEC3 545 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 EEPD1Q7L9B9 569 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 FAM126BQ8IXS8 530 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 RGS22Q8NE09 1264 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 ZSWIM5Q9P217 1185 aa14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 DDX49Q9Y6V7 483 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-206ENST00000519482 KIAA1217Q5T5P2 1943 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 RBM47A0AV96 593 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 B4DLN1 442 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 CD4P01730 458 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 GOLGA8HP0CJ92 632 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 CALML3P27482 149 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 MRPL12P52815 198 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 EPHB4P54760 987 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 RPS6P62753 249 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 TTC22Q5TAA0 569 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 CXCL17Q6UXB2 119 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 SLC30A10Q6XR72 485 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 ENAHQ8N8S7 591 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 RNPC3Q96LT9 517 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 RAD50Q92878 1312 aa14.55□□□□□ -0.08
TRAPPC9-206ENST00000519482 EDNRBP24530 442 aa14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 PPIGQ13427 754 aaKnown RBP eCLIP14.54□□□□□ -0.082e-7■■□□□ 11.8
TRAPPC9-206ENST00000519482 ITGA7Q13683 1181 aa14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 TMEM199Q8N511 208 aa14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 GUCD1Q96NT3 240 aa14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 WDR11Q9BZH6 1224 aa14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 UBA5Q9GZZ9 404 aa14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 UPF2Q9HAU5 1272 aaKnown RBP14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 TNKSO95271 1327 aa14.54□□□□□ -0.08
TRAPPC9-206ENST00000519482 ABCB11O95342 1321 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 TMEM265A0A087WTH1 108 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 NKRFO15226 690 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 GSPT1P15170 499 aaKnown RBP14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 CPT1AP50416 773 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 PDE4DQ08499 809 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 CDC37Q16543 378 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 USH1GQ495M9 461 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 TMEM63BQ5T3F8 832 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 ADGRF4Q8IZF3 695 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 RUFY2Q8WXA3 655 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 POLR3EQ9NVU0 708 aa14.53□□□□□ -0.08
TRAPPC9-206ENST00000519482 GRIN2DO15399 1336 aa14.52□□□□□ -0.08
TRAPPC9-206ENST00000519482 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 PARP1P09874 1014 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 SCFD2Q8WU76 684 aa14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 FAM161BQ96MY7 647 aa14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 PPP1R12CQ9BZL4 782 aa14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 IL25Q9H293 177 aa14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 CPVLQ9H3G5 476 aa14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 SEMA6BQ9H3T3 888 aa14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 SCN10AQ9Y5Y9 1956 aa14.52□□□□□ -0.09
TRAPPC9-206ENST00000519482 CSF2RAP15509 400 aa14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 PTGS1P23219 599 aa14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 TRDNQ13061 729 aa14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 BRDTQ58F21 947 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 IFIT1BQ5T764 474 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 PSRC1Q6PGN9 363 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 C16orf59Q7L2K0 433 aa14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 MCF2L2Q86YR7 1114 aa14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 JMJD4Q9H9V9 463 aa14.51□□□□□ -0.09
TRAPPC9-206ENST00000519482 DHX16O60231 1041 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 CHMLP26374 656 aa14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 PURAQ00577 322 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 SEC23AQ15436 765 aa14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 QRICH1Q2TAL8 776 aa14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 BMP2KLQ5H9B9 411 aa14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 TMEM240Q5SV17 173 aa14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 FBXO11Q86XK2 927 aa14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 OR6J1Q8NGC5 347 aa14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 CDX2Q99626 313 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 TTYH1Q9H313 450 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-206ENST00000519482 HIPK3Q9H422 1215 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms