RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 REXO1Q8N1G1 1221 aaKnown RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 OXER1Q8TDS5 423 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 NT5C3AQ9H0P0 336 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 SLC39A2Q9NP94 309 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 ANKIB1Q9P2G1 1089 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 HEG1Q9ULI3 1381 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 CDC25AP30304 524 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 GCKP35557 465 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 POLR2FP61218 127 aaKnown RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 CALCRLQ16602 461 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 CCDC25Q86WR0 208 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 N4BP2L2Q92802 583 aaPredicted RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 CUL5Q93034 780 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 SLC4A8Q2Y0W8 1093 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 GRIPAP1Q4V328 841 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 NEK8Q86SG6 692 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 MMGT1Q8N4V1 131 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 CCHCR1Q8TD31 782 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 CABLES1Q8TDN4 633 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 MICAL1Q8TDZ2 1067 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 SDR42E1Q8WUS8 393 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 EEF2KMTQ96G04 330 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 CHP1Q99653 195 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 TNFAIP3P21580 790 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 PCK1P35558 622 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 NT5C2P49902 561 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 TSNAXIP1Q2TAA8 658 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 C10orf76Q5T2E6 689 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 CEP128Q6ZU80 1094 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 TRAPPC11Q7Z392 1133 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 NLRP14Q86W24 1093 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 GPIHBP1Q8IV16 184 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 IGDCC4Q8TDY8 1250 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.917e-8■■□□□ 13
PCM1-212ENST00000519253 ATP6V1G3Q96LB4 118 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 CXorf56Q9H5V9 222 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 PLEKHG2Q9H7P9 1386 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 ANKRD62A6NC57 917 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 LUC7L3O95232 432 aaKnown RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 PLCG2P16885 1265 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 ATP2C1P98194 919 aaPredicted RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 FKBP3Q00688 224 aaKnown RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 TFAP4Q01664 338 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 KCNB1Q14721 858 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 SYCP3Q8IZU3 236 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 MAP3K14Q99558 947 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCM1-212ENST00000519253 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 KIF20BQ96Q89 1820 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 FAM237AA0A1B0GTK4 181 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 LRRIQ3A6PVS8 624 aaPredicted RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 CCDC188H7C350 402 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 CALUO43852 315 aaPredicted RBP9.36□□□□□ -0.91
PCM1-212ENST00000519253 ERCC3P19447 782 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 HAUS3Q68CZ6 603 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 PPFIBP2Q8ND30 876 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 EDEM3Q9BZQ6 932 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
PCM1-212ENST00000519253 GRID2IPA4D2P6 1211 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 CLTAP09496 248 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 PNMA1Q8ND90 353 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 RIN2Q8WYP3 895 aaPredicted RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 ANKRD2Q9GZV1 360 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 GLT8D2Q9H1C3 349 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 LOC102724159A0A0B4J2E5 919 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 SERPING1P05155 500 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 LRRC63Q05C16 580 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 PWP2Q15269 919 aaKnown RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 TMTC3Q6ZXV5 915 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 LCORLQ8N3X6 602 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 PAIP2Q9BPZ3 127 aaKnown RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 EPN3Q9H201 632 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 GMNCA6NCL1 334 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 ATP2A1O14983 1001 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 PRKAB2O43741 272 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 CTNND1O60716 968 aaKnown RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 HIP1RO75146 1068 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 FAM26FQ5R3K3 315 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 TBC1D31Q96DN5 1066 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 PLAAQ9Y263 795 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 MPHOSPH10O00566 681 aaKnown RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 AARSP49588 968 aaKnown RBP eCLIP9.35□□□□□ -0.91
PCM1-212ENST00000519253 FAM47AQ5JRC9 791 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 NT5DC1Q5TFE4 455 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 TTLL11Q8NHH1 800 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 KLC4Q9NSK0 619 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 INTS9Q9NV88 658 aaKnown RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 SMCO2A6NFE2 343 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 E2F5Q15329 346 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 PAPD7Q5XG87 772 aaKnown RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 LRRC1Q9BTT6 524 aa9.35□□□□□ -0.91
PCM1-212ENST00000519253 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
PCM1-212ENST00000519253 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
PCM1-212ENST00000519253 HNRNPH1P31943 449 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms