RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 CCDC96Q2M329 555 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 KIAA1211Q6ZU35 1233 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 MORC4Q8TE76 937 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 CLEC4DQ8WXI8 215 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
TRIM35-202ENST00000519219 NECAB3Q96P71 396 aaPredicted RBP10.35□□□□□ -0.75
TRIM35-202ENST00000519219 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
TRIM35-202ENST00000519219 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 BRWD1Q9NSI6 2320 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 KIAA1217Q5T5P2 1943 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 TRANK1O15050 2925 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 A0A0D9SFI3 127 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 EPOPA6NHQ4 379 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 TNFRSF10AO00220 468 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 RFXAPO00287 272 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 ERC2O15083 957 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 ICAM1P05362 532 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 SLC3A2P08195 630 aaKnown RBP10.34□□□□□ -0.75
TRIM35-202ENST00000519219 MX1P20591 662 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 ALDH5A1P51649 535 aaPredicted RBP10.34□□□□□ -0.75
TRIM35-202ENST00000519219 RAB30Q15771 203 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 AKNAD1Q5T1N1 836 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 SYDE2Q5VT97 1194 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 IQSEC1Q6DN90 963 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 SPRED2Q7Z698 418 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 MICALL1Q8N3F8 863 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
TRIM35-202ENST00000519219 COPS5Q92905 334 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 FAM227BQ96M60 508 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 ASB2Q96Q27 587 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 ALDH8A1Q9H2A2 487 aaPredicted RBP10.34□□□□□ -0.75
TRIM35-202ENST00000519219 VTA1Q9NP79 307 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 THEGQ9P2T0 379 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 MSRAQ9UJ68 235 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 MYH7BA7E2Y1 1941 aa10.34□□□□□ -0.75
TRIM35-202ENST00000519219 LAMA4Q16363 1823 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 ORC4O43929 436 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 CABYRO75952 493 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 MYL3P08590 195 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 PURAQ00577 322 aaKnown RBP10.33□□□□□ -0.76
TRIM35-202ENST00000519219 DUSP28Q4G0W2 176 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
TRIM35-202ENST00000519219 KRT40Q6A162 431 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 BTNL9Q6UXG8 535 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 DEFB128Q7Z7B8 93 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 ZNF589Q86UQ0 364 aaPredicted RBP10.33□□□□□ -0.76
TRIM35-202ENST00000519219 ADAMTS19Q8TE59 1207 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 DCAF4Q8WV16 495 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 TMEM47Q9BQJ4 181 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 WDR11Q9BZH6 1224 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 CPVLQ9H3G5 476 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 CERS4Q9HA82 394 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 ANAPC4Q9UJX5 808 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 TNKSO95271 1327 aa10.33□□□□□ -0.76
TRIM35-202ENST00000519219 PTPDC1A2A3K4 754 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 ZEB2O60315 1214 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 ARIH2O95376 493 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 FGRP09769 529 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 COL9A1P20849 921 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 CALML3P27482 149 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 HAND2P61296 217 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 TFF2Q03403 129 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 LRRFIP1Q32MZ4 808 aaKnown RBP10.32□□□□□ -0.76
TRIM35-202ENST00000519219 PPP2R2DQ66LE6 453 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 TBC1D10CQ8IV04 446 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 OR6J1Q8NGC5 347 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 ATXN2LQ8WWM7 1075 aaKnown RBP10.32□□□□□ -0.76
TRIM35-202ENST00000519219 SLC28A3Q9HAS3 691 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 TOMM22Q9NS69 142 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 Q9Y3F1 56 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 SLC4A7Q9Y6M7 1214 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 BDP1A6H8Y1 2624 aa10.32□□□□□ -0.76
TRIM35-202ENST00000519219 RBM47A0AV96 593 aaKnown RBP10.31□□□□□ -0.76
TRIM35-202ENST00000519219 FGAP02671 866 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 CA3P07451 260 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 GOLGA8HP0CJ92 632 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 PDHBP11177 359 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 ATP2A2P16615 1042 aaKnown RBP10.31□□□□□ -0.76
TRIM35-202ENST00000519219 ALX1Q15699 326 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 NBPF20Q3BBV1 942 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 FAM47CQ5HY64 1035 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 TBC1D5Q92609 795 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 CTAGE1Q96RT6 745 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 PCDHA11Q9Y5I1 949 aa10.31□□□□□ -0.76
TRIM35-202ENST00000519219 TOP1P11387 765 aaKnown RBP10.3□□□□□ -0.76
TRIM35-202ENST00000519219 EDNRBP24530 442 aa10.3□□□□□ -0.76
TRIM35-202ENST00000519219 KCNQ1P51787 676 aa10.3□□□□□ -0.76
TRIM35-202ENST00000519219 RPS6P62753 249 aaKnown RBP10.3□□□□□ -0.76
TRIM35-202ENST00000519219 MRPS5P82675 430 aaKnown RBP10.3□□□□□ -0.76
TRIM35-202ENST00000519219 ZNF543Q08ER8 600 aa10.3□□□□□ -0.76
TRIM35-202ENST00000519219 NMIQ13287 307 aaPredicted RBP10.3□□□□□ -0.76
TRIM35-202ENST00000519219 TCTN1Q2MV58 587 aa10.3□□□□□ -0.76
TRIM35-202ENST00000519219 ANKRD45Q5TZF3 282 aa10.3□□□□□ -0.76
TRIM35-202ENST00000519219 RNF207Q6ZRF8 634 aa10.3□□□□□ -0.76
TRIM35-202ENST00000519219 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
TRIM35-202ENST00000519219 UHRF1Q96T88 793 aaPredicted RBP10.3□□□□□ -0.76
TRIM35-202ENST00000519219 ZKSCAN3Q9BRR0 538 aa10.3□□□□□ -0.76
TRIM35-202ENST00000519219 MTIF3Q9H2K0 278 aaKnown RBP10.3□□□□□ -0.76
TRIM35-202ENST00000519219 NEDD4P46934 1319 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms