RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 A1CFQ9NQ94 594 aaKnown RBP8.78□□□□□ -1
SDCBP-206ENST00000519115 SLC5A4Q9NY91 659 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 FBXO40Q9UH90 709 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 ALPK3Q96L96 1907 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 DNAJC25-GNG10A0A024R161 153 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 PALM3A6NDB9 673 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-206ENST00000519115 DDAH1O94760 285 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 GJB1P08034 283 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 CNTN2Q02246 1040 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 QRICH1Q2TAL8 776 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 ZNF792Q3KQV3 632 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 TKFCQ3LXA3 575 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 PRAMEF19Q5SWL8 479 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 OLFML2BQ68BL8 750 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1.01
SDCBP-206ENST00000519115 MICU3Q86XE3 530 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 HOMER1Q86YM7 354 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 PLCD3Q8N3E9 789 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 TRPV1Q8NER1 839 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 SMARCC2Q8TAQ2 1214 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 U2AF1L4Q8WU68 220 aaKnown RBP8.77□□□□□ -1.01
SDCBP-206ENST00000519115 PIBF1Q8WXW3 757 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 BRF1Q92994 677 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 FGD4Q96M96 766 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 HMX1Q9NP08 348 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-206ENST00000519115 PAK6Q9NQU5 681 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-206ENST00000519115 SMC3Q9UQE7 1217 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-206ENST00000519115 ATP6V1DQ9Y5K8 247 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 DDX49Q9Y6V7 483 aaKnown RBP8.77□□□□□ -1.01
SDCBP-206ENST00000519115 PFASO15067 1338 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 RPTORQ8N122 1335 aa8.77□□□□□ -1.01
SDCBP-206ENST00000519115 MKI67P46013 3256 aaKnown RBP8.76□□□□□ -1.01
SDCBP-206ENST00000519115 PTPDC1A2A3K4 754 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 POTEB2H3BUK9 544 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 CYTH3O43739 400 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 PLEKHA8P1O95397 391 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 IGHA2P01877 340 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 CYBAP13498 195 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 CNGA1P29973 690 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 GJA8P48165 433 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 ANO1Q5XXA6 986 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 APOA5Q6Q788 366 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 SLC30A10Q6XR72 485 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 FBXO11Q86XK2 927 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 CMTR1Q8N1G2 835 aaKnown RBP8.76□□□□□ -1.01
SDCBP-206ENST00000519115 CTCFLQ8NI51 663 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-206ENST00000519115 CLEC4DQ8WXI8 215 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 PURBQ96QR8 312 aaKnown RBP8.76□□□□□ -1.01
SDCBP-206ENST00000519115 LZTS2Q9BRK4 669 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 RBM27Q9P2N5 1060 aaKnown RBP8.76□□□□□ -1.01
SDCBP-206ENST00000519115 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 NAP1L2Q9ULW6 460 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-206ENST00000519115 SLC12A7Q9Y666 1083 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 KIAA1217Q5T5P2 1943 aa8.76□□□□□ -1.01
SDCBP-206ENST00000519115 TNRC18O15417 2968 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-206ENST00000519115 KLF18A0A0U1RQI7 1052 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 ZBTB43O43298 467 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 PPP1R11O60927 126 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-206ENST00000519115 SGPL1O95470 568 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 BRD1O95696 1058 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 TFRCP02786 760 aaKnown RBP8.75□□□□□ -1.01
SDCBP-206ENST00000519115 CALML3P27482 149 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 KIF5BP33176 963 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 RGS19P49795 217 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 GNAQP50148 359 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 APOBRQ0VD83 1088 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 BAATQ14032 418 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-206ENST00000519115 ATL3Q6DD88 541 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 TEX2Q8IWB9 1127 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 FAM133AQ8N9E0 248 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 MTMR8Q96EF0 704 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 PIGSQ96S52 555 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 TINF2Q9BSI4 451 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 RIOX1Q9H6W3 641 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 RBM28Q9NW13 759 aaKnown RBP8.75□□□□□ -1.01
SDCBP-206ENST00000519115 CYP39A1Q9NYL5 469 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 DIS3Q9Y2L1 958 aaKnown RBP8.75□□□□□ -1.01
SDCBP-206ENST00000519115 ASTN1O14525 1302 aa8.75□□□□□ -1.01
SDCBP-206ENST00000519115 hCG_1642624A0A1W2PR95 340 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 SOWAHBA6NEL2 793 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 GOLGA8AA7E2F4 631 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 GOLGA8BA8MQT2 603 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 ZBTB5O15062 677 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 FARP2O94887 1054 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 SNAI1O95863 264 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 IFNAR1P17181 557 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 MLLT1Q03111 559 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 RNF207Q6ZRF8 634 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 ARMCX2Q7L311 632 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 SRBD1Q8N5C6 995 aaKnown RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 FANCBQ8NB91 859 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 DIS3LQ8TF46 1054 aaKnown RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 WASF1Q92558 559 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 TBC1D5Q92609 795 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 LENG1Q96BZ8 264 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 GBP4Q96PP9 640 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 SPZ1Q9BXG8 430 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms