RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 C12orf49Q9H741 205 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 HDAC9Q9UKV0 1011 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 ZNRF3Q9ULT6 936 aa8.12□□□□□ -1.11
CCDC6-203ENST00000518638 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
CCDC6-203ENST00000518638 H7C1D1 291 aa8.11□□□□□ -1.11
CCDC6-203ENST00000518638 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
CCDC6-203ENST00000518638 B3GALT4O96024 378 aa8.11□□□□□ -1.11
CCDC6-203ENST00000518638 ZNF157P51786 506 aaPredicted RBP8.11□□□□□ -1.11
CCDC6-203ENST00000518638 CRAMP1Q96RY5 1269 aa8.11□□□□□ -1.11
CCDC6-203ENST00000518638 GBA2Q9HCG7 927 aaPredicted RBP8.11□□□□□ -1.11
CCDC6-203ENST00000518638 RNF186Q9NXI6 227 aa8.11□□□□□ -1.11
CCDC6-203ENST00000518638 FAM155AB1AL88 458 aaPredicted RBP8.1□□□□□ -1.11
CCDC6-203ENST00000518638 HMOX1P09601 288 aa8.1□□□□□ -1.11
CCDC6-203ENST00000518638 SNRPA1P09661 255 aaKnown RBP8.1□□□□□ -1.11
CCDC6-203ENST00000518638 GSTT1P30711 240 aa8.1□□□□□ -1.11
CCDC6-203ENST00000518638 GMPSP49915 693 aaPredicted RBP8.1□□□□□ -1.11
CCDC6-203ENST00000518638 KIF23Q02241 960 aaPredicted RBP8.1□□□□□ -1.11
CCDC6-203ENST00000518638 C3orf58Q8NDZ4 430 aa8.1□□□□□ -1.11
CCDC6-203ENST00000518638 POLR3GLQ9BT43 218 aa8.1□□□□□ -1.11
CCDC6-203ENST00000518638 RNF19AQ9NV58 838 aa8.1□□□□□ -1.11
CCDC6-203ENST00000518638 FAM8A1Q9UBU6 413 aa8.1□□□□□ -1.11
CCDC6-203ENST00000518638 CEMIPQ8WUJ3 1361 aa8.1□□□□□ -1.11
CCDC6-203ENST00000518638 CYP26A1O43174 497 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 PAPLNO95428 1278 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 NLRP12P59046 1061 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 TAGLNQ01995 201 aaKnown RBP8.09□□□□□ -1.11
CCDC6-203ENST00000518638 CXCL9Q07325 125 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 FAAP100Q0VG06 881 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 ZNF124Q15973 351 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 AOC3Q16853 763 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 FBXO46Q6PJ61 603 aaPredicted RBP8.09□□□□□ -1.11
CCDC6-203ENST00000518638 KRT26Q7Z3Y9 468 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 DCPSQ96C86 337 aaKnown RBP8.09□□□□□ -1.11
CCDC6-203ENST00000518638 PAK6Q9NQU5 681 aaPredicted RBP8.09□□□□□ -1.11
CCDC6-203ENST00000518638 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 KNSTRNQ9Y448 316 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 LAMB4A4D0S4 1761 aa8.09□□□□□ -1.11
CCDC6-203ENST00000518638 ABCC12Q96J65 1359 aa8.09□□□□□ -1.12
CCDC6-203ENST00000518638 ERVV-1B6SEH8 477 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 DIAPH1O60610 1272 aaKnown RBP8.08□□□□□ -1.12
CCDC6-203ENST00000518638 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
CCDC6-203ENST00000518638 FKBP1BP68106 108 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 DAB2P98082 770 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 GSTM4Q03013 218 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 KIAA2012Q0VF49 1180 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 INTS3Q68E01 1043 aaKnown RBP8.08□□□□□ -1.12
CCDC6-203ENST00000518638 DPF2Q92785 391 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 RTFDC1Q9BY42 306 aaPredicted RBP8.08□□□□□ -1.12
CCDC6-203ENST00000518638 NRSN2Q9GZP1 204 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 PANK3Q9H999 370 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 CNOT7Q9UIV1 285 aaKnown RBP8.08□□□□□ -1.12
CCDC6-203ENST00000518638 PPM1HQ9ULR3 514 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 ATP6V0A2Q9Y487 856 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 AK5Q9Y6K8 562 aa8.08□□□□□ -1.12
CCDC6-203ENST00000518638 DDX60Q8IY21 1712 aaKnown RBP8.08□□□□□ -1.12
CCDC6-203ENST00000518638 RBBP6Q7Z6E9 1792 aaKnown RBP8.07□□□□□ -1.12
CCDC6-203ENST00000518638 USP17L7P0C7H9 530 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 RPS12P25398 132 aaKnown RBP8.07□□□□□ -1.12
CCDC6-203ENST00000518638 PKN1Q16512 942 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 PAOXQ6QHF9 649 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 DPP8Q6V1X1 898 aaPredicted RBP8.07□□□□□ -1.12
CCDC6-203ENST00000518638 TMC4Q7Z404 712 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 PPP1R42Q7Z4L9 355 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 USP48Q86UV5 1035 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 IL17REQ8NFR9 667 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 AKAP2Q9Y2D5 859 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 USP16Q9Y5T5 823 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 NUP98P52948 1817 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 PAPPA2Q9BXP8 1791 aa8.07□□□□□ -1.12
CCDC6-203ENST00000518638 FAM95CA0A1B0GW59 222 aa8.06□□□□□ -1.12
CCDC6-203ENST00000518638 MEGF11A6BM72 1044 aa8.06□□□□□ -1.12
CCDC6-203ENST00000518638 E9PSI1 815 aa8.06□□□□□ -1.12
CCDC6-203ENST00000518638 BBOX1O75936 387 aa8.06□□□□□ -1.12
CCDC6-203ENST00000518638 FXR1P51114 621 aaKnown RBP eCLIP8.06□□□□□ -1.12
CCDC6-203ENST00000518638 PSMD2Q13200 908 aa8.06□□□□□ -1.12
CCDC6-203ENST00000518638 KIF6Q6ZMV9 814 aa8.06□□□□□ -1.12
CCDC6-203ENST00000518638 GIPC2Q8TF65 315 aa8.06□□□□□ -1.12
CCDC6-203ENST00000518638 RTF1Q92541 710 aaKnown RBP8.06□□□□□ -1.12
CCDC6-203ENST00000518638 TRIM56Q9BRZ2 755 aaKnown RBP8.06□□□□□ -1.12
CCDC6-203ENST00000518638 MAP3K15Q6ZN16 1313 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 LOC100289279A0A1B0GTE1 492 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 BIN1O00499 593 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 RAD17O75943 681 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 FARP2O94887 1054 aaPredicted RBP8.05□□□□□ -1.12
CCDC6-203ENST00000518638 NFKBIBQ15653 356 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 PARP10Q53GL7 1025 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 RASAL3Q86YV0 1011 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 ZNF296Q8WUU4 475 aaPredicted RBP8.05□□□□□ -1.12
CCDC6-203ENST00000518638 USP26Q9BXU7 913 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 GPN3Q9UHW5 284 aaPredicted RBP8.05□□□□□ -1.12
CCDC6-203ENST00000518638 ANKRD36CQ5JPF3 1778 aa8.05□□□□□ -1.12
CCDC6-203ENST00000518638 TCERG1O14776 1098 aaKnown RBP8.04□□□□□ -1.12
CCDC6-203ENST00000518638 CYP11A1P05108 521 aa8.04□□□□□ -1.12
CCDC6-203ENST00000518638 PIP4K2AP48426 406 aaPredicted RBP8.04□□□□□ -1.12
CCDC6-203ENST00000518638 PPP2R3AQ06190 1150 aa8.04□□□□□ -1.12
CCDC6-203ENST00000518638 SREBF2Q12772 1141 aa8.04□□□□□ -1.12
CCDC6-203ENST00000518638 AP3B2Q13367 1082 aa8.04□□□□□ -1.12
CCDC6-203ENST00000518638 HLFQ16534 295 aa8.04□□□□□ -1.12
CCDC6-203ENST00000518638 SP8Q8IXZ3 490 aa8.04□□□□□ -1.12
CCDC6-203ENST00000518638 SHISA5Q8N114 240 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms