RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 BIN1O00499 593 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 MEFVO15553 781 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-207ENST00000518569 USP2O75604 605 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-207ENST00000518569 L1CAMP32004 1257 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 FZD5Q13467 585 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 HSF5Q4G112 596 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-207ENST00000518569 FOXB2Q5VYV0 432 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 GIMAP6Q6P9H5 292 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 CEP128Q6ZU80 1094 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 JAZF1Q86VZ6 243 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 JAMLQ86YT9 394 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 SYNPOQ8N3V7 929 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 MYLIPQ8WY64 445 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 EXOC2Q96KP1 924 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 CLEC1BQ9P126 229 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 ACSL6Q9UKU0 697 aa5.5□□□□□ -1.53
VPS13B-207ENST00000518569 TMA7Q9Y2S6 64 aaKnown RBP5.5□□□□□ -1.53
VPS13B-207ENST00000518569 NOTOA8MTQ0 251 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 ENPP3O14638 875 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 NPHS1O60500 1241 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 LTBRP36941 435 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 GTF2A2P52657 109 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 SQSTM1Q13501 440 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 PRSS53Q2L4Q9 553 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 FAM209AQ5JX71 171 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 DENND5AQ6IQ26 1287 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 HOMER1Q86YM7 354 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 PPIL6Q8IXY8 311 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 ABHD4Q8TB40 342 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 DCAF4Q8WV16 495 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 DIO2Q92813 273 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 JMJD8Q96S16 334 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 ZFYVE21Q9BQ24 234 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 CRTAC1Q9NQ79 661 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 MRPS23Q9Y3D9 190 aaKnown RBP5.49□□□□□ -1.53
VPS13B-207ENST00000518569 TAF6LQ9Y6J9 622 aa5.49□□□□□ -1.53
VPS13B-207ENST00000518569 C7orf72A4D263 438 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 ARNTLO00327 626 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 JUNBP17275 347 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-207ENST00000518569 ITGB5P18084 799 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 ERVFC1P60507 584 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 LAPTM5Q13571 262 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 NTRK3Q16288 839 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 STYK1Q6J9G0 422 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 MAMDC2Q7Z304 686 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-207ENST00000518569 NLRX1Q86UT6 975 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 CCDC103Q8IW40 242 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 APPBP2Q92624 585 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 KIRREL1Q96J84 757 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 MRPL4Q9BYD3 311 aaKnown RBP5.48□□□□□ -1.53
VPS13B-207ENST00000518569 KANSL2Q9H9L4 492 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 GPR27Q9NS67 375 aa5.48□□□□□ -1.53
VPS13B-207ENST00000518569 TMEFF2Q9UIK5 374 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-207ENST00000518569 MRPL42Q9Y6G3 142 aaKnown RBP5.48□□□□□ -1.53
VPS13B-207ENST00000518569 ESYT3A0FGR9 886 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 PSPNO60542 156 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 C6orf222P0C671 652 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-207ENST00000518569 PNLIPP16233 465 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 GABREP78334 506 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 USP53Q70EK8 1073 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 CPNE8Q86YQ8 564 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 PTPRN2Q92932 1015 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 SHISA4Q96DD7 197 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 GPR160Q9UJ42 338 aa5.47□□□□□ -1.53
VPS13B-207ENST00000518569 A0A1W2PQ27 194 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 A0A1W2PQ64 194 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 A0A1W2PQC6 194 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 A0A1W2PQD8 194 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 AQP7O14520 342 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 PLD2O14939 933 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 KCNQ2O43526 872 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 MYO1BO43795 1136 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 EFCAB14O75071 495 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 NAT1P18440 290 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 MVKQ03426 396 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 INF2Q27J81 1249 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 TIGD5Q53EQ6 642 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 TRIM61Q5EBN2 209 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 SDE2Q6IQ49 451 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 RCBTB1Q8NDN9 531 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 PLCD4Q9BRC7 762 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 C19orf44Q9H6X5 657 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 NCOA5Q9HCD5 579 aaKnown RBP5.46□□□□□ -1.54
VPS13B-207ENST00000518569 PDLIM7Q9NR12 457 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS13B-207ENST00000518569 IMPACTQ9P2X3 320 aa5.46□□□□□ -1.54
VPS13B-207ENST00000518569 TIMM13Q9Y5L4 95 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-207ENST00000518569 CDC45O75419 566 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 RFPL3O75679 317 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 PAPLNO95428 1278 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 C8AP07357 584 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 GLI1P08151 1106 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 PRKCAP17252 672 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 TRHRP34981 398 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-207ENST00000518569 ARL4AP40617 200 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 GPR85P60893 370 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 RPL11P62913 178 aaKnown RBP5.45□□□□□ -1.54
VPS13B-207ENST00000518569 TCEA2Q15560 299 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 FNDC3BQ53EP0 1204 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms