RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 LENG1Q96BZ8 264 aaPredicted RBP11.46□□□□□ -0.57
TTC1-202ENST00000518560 EVI5LQ96CN4 794 aa11.46□□□□□ -0.57
TTC1-202ENST00000518560 MMP19Q99542 508 aa11.46□□□□□ -0.57
TTC1-202ENST00000518560 SLF1Q9BQI6 1058 aa11.46□□□□□ -0.57
TTC1-202ENST00000518560 NACAP1Q9BZK3 213 aa11.46□□□□□ -0.57
TTC1-202ENST00000518560 MROH8Q9H579 483 aa11.46□□□□□ -0.57
TTC1-202ENST00000518560 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
TTC1-202ENST00000518560 ISY1Q9ULR0 285 aaKnown RBP11.46□□□□□ -0.57
TTC1-202ENST00000518560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.46□□□□□ -0.57
TTC1-202ENST00000518560 RIPK3Q9Y572 518 aa11.46□□□□□ -0.57
TTC1-202ENST00000518560 SOX1O00570 391 aaPredicted RBP11.45□□□□□ -0.58
TTC1-202ENST00000518560 STRNO43815 780 aa11.45□□□□□ -0.58
TTC1-202ENST00000518560 TAL1P17542 331 aaPredicted RBP11.45□□□□□ -0.58
TTC1-202ENST00000518560 STAT3P40763 770 aa11.45□□□□□ -0.58
TTC1-202ENST00000518560 NMIQ13287 307 aaPredicted RBP11.45□□□□□ -0.58
TTC1-202ENST00000518560 SNRNP48Q6IEG0 339 aaKnown RBP11.45□□□□□ -0.58
TTC1-202ENST00000518560 NEDD1Q8NHV4 660 aa11.45□□□□□ -0.58
TTC1-202ENST00000518560 SENP6Q9GZR1 1112 aaPredicted RBP11.45□□□□□ -0.58
TTC1-202ENST00000518560 RAVER2Q9HCJ3 691 aaKnown RBP11.45□□□□□ -0.58
TTC1-202ENST00000518560 TSHZ2Q9NRE2 1034 aa11.45□□□□□ -0.58
TTC1-202ENST00000518560 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
TTC1-202ENST00000518560 SLC25A27O95847 323 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 TTLL1O95922 423 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 CAPN2P17655 700 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 GMPRP36959 345 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 SNAP25P60880 206 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 PDE4BQ07343 736 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 KCTD2Q14681 263 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 SMYD5Q6GMV2 418 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 ABRAQ8N0Z2 381 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 RILPL2Q969X0 211 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 GDF15Q99988 308 aa11.44□□□□□ -0.58
TTC1-202ENST00000518560 TSPY2A6NKD2 308 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 MAGEA10P43363 369 aaPredicted RBP11.43□□□□□ -0.58
TTC1-202ENST00000518560 WNT7BP56706 349 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 HAND2P61296 217 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 IRX6P78412 446 aaPredicted RBP11.43□□□□□ -0.58
TTC1-202ENST00000518560 ZNF792Q3KQV3 632 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 PLEKHM2Q8IWE5 1019 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 NPAS3Q8IXF0 933 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 GMCL1P1Q8NEA9 526 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 USB1Q9BQ65 265 aaKnown RBP11.43□□□□□ -0.58
TTC1-202ENST00000518560 TEX13BQ9BXU2 312 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 ZNF287Q9HBT7 754 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 IL17RBQ9NRM6 502 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 HOMER2Q9NSB8 354 aa11.43□□□□□ -0.58
TTC1-202ENST00000518560 TMEM232C9JQI7 657 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 SEPT4O43236 478 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 RANBP6O60518 1105 aaKnown RBP11.42□□□□□ -0.58
TTC1-202ENST00000518560 SLC3A2P08195 630 aaKnown RBP11.42□□□□□ -0.58
TTC1-202ENST00000518560 BMP3P12645 472 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 MCCP23508 829 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
TTC1-202ENST00000518560 KCTD1Q719H9 257 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 CHD1LQ86WJ1 897 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 PRPF38AQ8NAV1 312 aaKnown RBP11.42□□□□□ -0.58
TTC1-202ENST00000518560 MKL1Q969V6 931 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 FERMT2Q96AC1 680 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 FGD4Q96M96 766 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 SLC38A10Q9HBR0 1119 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 HELLSQ9NRZ9 838 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 TOMM22Q9NS69 142 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 SLC5A4Q9NY91 659 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
TTC1-202ENST00000518560 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
TTC1-202ENST00000518560 CCDC171Q6TFL3 1326 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 DNM1LO00429 736 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 MSCO60682 206 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 ZBED4O75132 1171 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 PGK1P00558 417 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 HSPD1P10809 573 aaKnown RBP11.41□□□□□ -0.58
TTC1-202ENST00000518560 RTP1P59025 263 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 MDM2Q00987 491 aaPredicted RBP11.41□□□□□ -0.58
TTC1-202ENST00000518560 NUCB1Q02818 461 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 IKQ13123 557 aaPredicted RBP11.41□□□□□ -0.58
TTC1-202ENST00000518560 LRRC41Q15345 812 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 MCMDC2Q4G0Z9 681 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 TBC1D10CQ8IV04 446 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 TINF2Q9BSI4 451 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 RWDD1Q9H446 243 aaPredicted RBP11.41□□□□□ -0.58
TTC1-202ENST00000518560 ANAPC4Q9UJX5 808 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 FEM1BQ9UK73 627 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
TTC1-202ENST00000518560 CTDP1Q9Y5B0 961 aaPredicted RBP11.41□□□□□ -0.58
TTC1-202ENST00000518560 SUPT16HQ9Y5B9 1047 aaKnown RBP11.41□□□□□ -0.58
TTC1-202ENST00000518560 RANBP2P49792 3224 aaKnown RBP11.41□□□□□ -0.58
TTC1-202ENST00000518560 ZNF536O15090 1300 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 DNAJC25-GNG10A0A024R161 153 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 KBTBD13C9JR72 458 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 ADCY6O43306 1168 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 DXOO77932 396 aaKnown RBP11.4□□□□□ -0.58
TTC1-202ENST00000518560 FGAP02671 866 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 ZNF865P0CJ78 1059 aaPredicted RBP11.4□□□□□ -0.58
TTC1-202ENST00000518560 SDSP20132 328 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 ADCYAP1R1P41586 468 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 SLC1A4P43007 532 aa11.4□□□□□ -0.58
TTC1-202ENST00000518560 STAT2P52630 851 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms