RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 NKX1-1Q15270 411 aaPredicted RBP16.89■□□□□ 0.29
PCM1-204ENST00000517730 CFAP221Q4G0U5 840 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 NAALADL2Q58DX5 795 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 CCDC43Q96MW1 224 aaKnown RBP16.89■□□□□ 0.29
PCM1-204ENST00000517730 MLXIPQ9HAP2 919 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 MAGEF1Q9HAY2 307 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 KBTBD4Q9NVX7 518 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 MINDY4BA8MYZ0 360 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 HMGB1P1B2RPK0 211 aaPredicted RBP16.89■□□□□ 0.29
PCM1-204ENST00000517730 IRS4O14654 1257 aaPredicted RBP16.89■□□□□ 0.29
PCM1-204ENST00000517730 SCG2P13521 617 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 NR1D1P20393 614 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 CALML3P27482 149 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 KRT26Q7Z3Y9 468 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 SYNE4Q8N205 404 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 SH2D3CQ8N5H7 860 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 RASSF8Q8NHQ8 419 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 JPH2Q9BR39 696 aaPredicted RBP16.89■□□□□ 0.29
PCM1-204ENST00000517730 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 C21orf2O43822 256 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 PDE8AO60658 829 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 KRT14P02533 472 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 MIIPQ5JXC2 388 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 KCTD16Q68DU8 428 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 CUEDC2Q9H467 287 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 LRP5O75197 1615 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 ZNF233A6NK53 670 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 MDH1P40925 334 aaKnown RBP16.88■□□□□ 0.29
PCM1-204ENST00000517730 NEDD9Q14511 834 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 DTHD1Q6ZMT9 781 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 RNF10Q8N5U6 811 aaKnown RBP16.88■□□□□ 0.29
PCM1-204ENST00000517730 C3orf20Q8ND61 904 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 GIMAP7Q8NHV1 300 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 WHAMMQ8TF30 809 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 ATP6V1G3Q96LB4 118 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 CCSER1Q9C0I3 900 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 RBM12Q9NTZ6 932 aaKnown RBP16.88■□□□□ 0.29
PCM1-204ENST00000517730 ARHGAP20Q9P2F6 1191 aa16.88■□□□□ 0.29
PCM1-204ENST00000517730 FAM107AO95990 144 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 PPP4R3AQ6IN85 833 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 ARFGAP2Q8N6H7 521 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 MYCBPAPQ8TBZ2 947 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 CCT8L2Q96SF2 557 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 ACTR5Q9H9F9 607 aaPredicted RBP16.87■□□□□ 0.29
PCM1-204ENST00000517730 KLC4Q9NSK0 619 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 MYH3P11055 1940 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 AKR1B10O60218 316 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 GUCY1A3Q02108 690 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
PCM1-204ENST00000517730 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 MIGA1Q8NAN2 632 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.292e-8■■■■□ 26.6
PCM1-204ENST00000517730 NOX5Q96PH1 765 aa16.87■□□□□ 0.29
PCM1-204ENST00000517730 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
PCM1-204ENST00000517730 EIF4A3P38919 411 aaKnown RBP16.86■□□□□ 0.29
PCM1-204ENST00000517730 UBA7P41226 1012 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 RNF187Q5TA31 235 aaPredicted RBP16.86■□□□□ 0.29
PCM1-204ENST00000517730 ZKSCAN4Q969J2 545 aaPredicted RBP16.86■□□□□ 0.29
PCM1-204ENST00000517730 TLR10Q9BXR5 811 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 TMCO5BA8MYB1 307 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 RASSF9O75901 435 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 CXCR5P32302 372 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 MAGEA1P43355 309 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 MRPS25P82663 173 aaKnown RBP16.86■□□□□ 0.29
PCM1-204ENST00000517730 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 PREPLQ4J6C6 727 aaPredicted RBP16.86■□□□□ 0.29
PCM1-204ENST00000517730 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 SRBD1Q8N5C6 995 aaKnown RBP16.86■□□□□ 0.29
PCM1-204ENST00000517730 LRP2BPQ9P2M1 347 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 NFU1Q9UMS0 254 aa16.86■□□□□ 0.29
PCM1-204ENST00000517730 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 GOLGA6L7A0A1B0GV03 622 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 GRID2IPA4D2P6 1211 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 CDR1P51861 262 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 CCDC84Q86UT8 332 aaPredicted RBP16.85■□□□□ 0.29
PCM1-204ENST00000517730 CCDC50Q8IVM0 306 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
PCM1-204ENST00000517730 HEXIM1O94992 359 aaKnown RBP16.85■□□□□ 0.29
PCM1-204ENST00000517730 GLI1P08151 1106 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 FGRP09769 529 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 CARSP49589 748 aaKnown RBP16.85■□□□□ 0.29
PCM1-204ENST00000517730 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 C6orf89Q6UWU4 347 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 BLIDQ8IZY5 108 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 PIK3R5Q8WYR1 880 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 EPB41L5Q9HCM4 733 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 SMARCAL1Q9NZC9 954 aa16.85■□□□□ 0.29
PCM1-204ENST00000517730 TRMT112Q9UI30 125 aaKnown RBP16.85■□□□□ 0.29
PCM1-204ENST00000517730 DLEC1Q9Y238 1755 aa16.84■□□□□ 0.29
PCM1-204ENST00000517730 MAGEB6P1A0A0J9YX57 407 aa16.84■□□□□ 0.29
PCM1-204ENST00000517730 LAD1O00515 517 aa16.84■□□□□ 0.29
PCM1-204ENST00000517730 CYP7A1P22680 504 aa16.84■□□□□ 0.29
PCM1-204ENST00000517730 ITGB3BPQ13352 177 aaPredicted RBP16.84■□□□□ 0.29
PCM1-204ENST00000517730 KLHDC7AQ5VTJ3 777 aa16.84■□□□□ 0.29
PCM1-204ENST00000517730 CCDC13Q8IYE1 715 aa16.84■□□□□ 0.29
PCM1-204ENST00000517730 EIF1ADQ8N9N8 165 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms