RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SPC25Q9HBM1 224 aa28.65■■■□□ 2.18
PVT1-204ENST00000517525 GNEQ9Y223 722 aaKnown RBP28.65■■■□□ 2.18
PVT1-204ENST00000517525 LCTP09848 1927 aa28.65■■■□□ 2.18
PVT1-204ENST00000517525 RBM47A0AV96 593 aaKnown RBP28.64■■■□□ 2.18
PVT1-204ENST00000517525 CALML3P27482 149 aa28.64■■■□□ 2.18
PVT1-204ENST00000517525 TNFAIP2Q03169 654 aa28.64■■■□□ 2.18
PVT1-204ENST00000517525 KCNB2Q92953 911 aa28.64■■■□□ 2.18
PVT1-204ENST00000517525 MPHOSPH6Q99547 160 aaKnown RBP28.64■■■□□ 2.18
PVT1-204ENST00000517525 MAP3K20Q9NYL2 800 aaKnown RBP28.64■■■□□ 2.18
PVT1-204ENST00000517525 B4DLN1 442 aa28.63■■■□□ 2.17
PVT1-204ENST00000517525 CENPBP07199 599 aaPredicted RBP28.63■■■□□ 2.17
PVT1-204ENST00000517525 MRPL12P52815 198 aaKnown RBP28.63■■■□□ 2.17
PVT1-204ENST00000517525 CHRDL2Q6WN34 429 aa28.63■■■□□ 2.17
PVT1-204ENST00000517525 ZNF654Q8IZM8 581 aa28.63■■■□□ 2.17
PVT1-204ENST00000517525 PCSK9Q8NBP7 692 aaKnown RBP28.63■■■□□ 2.17
PVT1-204ENST00000517525 GDF15Q99988 308 aa28.63■■■□□ 2.17
PVT1-204ENST00000517525 A0A1W2PPC1 479 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 CTAGE5O15320 804 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 CYTH3O43739 400 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 BMP8BP34820 402 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 ACLYP53396 1101 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 ATN1P54259 1190 aaPredicted RBP28.62■■■□□ 2.17
PVT1-204ENST00000517525 RTP1P59025 263 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 COL9A3Q14050 684 aaPredicted RBP28.62■■■□□ 2.17
PVT1-204ENST00000517525 SGMS1Q86VZ5 419 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 SYTL5Q8TDW5 730 aaPredicted RBP28.62■■■□□ 2.17
PVT1-204ENST00000517525 LZTS2Q9BRK4 669 aa28.62■■■□□ 2.17
PVT1-204ENST00000517525 GPHNQ9NQX3 736 aaPredicted RBP28.62■■■□□ 2.17
PVT1-204ENST00000517525 PPP1R11O60927 126 aaPredicted RBP28.61■■■□□ 2.17
PVT1-204ENST00000517525 MYCNP04198 464 aaPredicted RBP28.61■■■□□ 2.17
PVT1-204ENST00000517525 KIF5BP33176 963 aa28.61■■■□□ 2.17
PVT1-204ENST00000517525 KRT32Q14532 448 aa28.61■■■□□ 2.17
PVT1-204ENST00000517525 NEK1Q96PY6 1258 aa28.61■■■□□ 2.17
PVT1-204ENST00000517525 SPZ1Q9BXG8 430 aa28.61■■■□□ 2.17
PVT1-204ENST00000517525 ZMYND8Q9ULU4 1186 aaPredicted RBP28.61■■■□□ 2.17
PVT1-204ENST00000517525 PNMA6FA0A0J9YX94 578 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.6■■■□□ 2.17
PVT1-204ENST00000517525 A0A1W2PQ45 241 aaPredicted RBP28.6■■■□□ 2.17
PVT1-204ENST00000517525 A0A1W2PQY0 241 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 OPLAHO14841 1288 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 EPB41L2O43491 1005 aaKnown RBP28.6■■■□□ 2.17
PVT1-204ENST00000517525 CALM1P0DP23 149 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 CALM2P0DP24 149 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 CALM3P0DP25 149 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 SMPD1P17405 629 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 GNAQP50148 359 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 EXOSC10Q01780 885 aaKnown RBP28.6■■■□□ 2.17
PVT1-204ENST00000517525 KCNA10Q16322 511 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 FBXO16Q8IX29 292 aaPredicted RBP28.6■■■□□ 2.17
PVT1-204ENST00000517525 RASEFQ8IZ41 740 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 CTCFLQ8NI51 663 aaPredicted RBP28.6■■■□□ 2.17
PVT1-204ENST00000517525 NUP133Q8WUM0 1156 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 TBC1D5Q92609 795 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 PDGFCQ9NRA1 345 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 PCDHA1Q9Y5I3 950 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 DDX49Q9Y6V7 483 aaKnown RBP28.6■■■□□ 2.17
PVT1-204ENST00000517525 ELP1O95163 1332 aa28.6■■■□□ 2.17
PVT1-204ENST00000517525 MYADML2A6NDP7 307 aa28.59■■■□□ 2.17
PVT1-204ENST00000517525 C6orf222P0C671 652 aaPredicted RBP28.59■■■□□ 2.17
PVT1-204ENST00000517525 HSD17B4P51659 736 aa28.59■■■□□ 2.17
PVT1-204ENST00000517525 DUSP28Q4G0W2 176 aa28.59■■■□□ 2.17
PVT1-204ENST00000517525 FERMT2Q96AC1 680 aa28.59■■■□□ 2.17
PVT1-204ENST00000517525 PIGSQ96S52 555 aa28.59■■■□□ 2.17
PVT1-204ENST00000517525 RBM27Q9P2N5 1060 aaKnown RBP28.59■■■□□ 2.17
PVT1-204ENST00000517525 LRRC37A2A6NM11 1700 aa28.59■■■□□ 2.17
PVT1-204ENST00000517525 TRIOBPQ9H2D6 2365 aa28.58■■■□□ 2.17
PVT1-204ENST00000517525 CCDC69A6NI79 296 aa28.58■■■□□ 2.17
PVT1-204ENST00000517525 PDE4DQ08499 809 aa28.58■■■□□ 2.17
PVT1-204ENST00000517525 DHX32Q7L7V1 743 aaKnown RBP28.58■■■□□ 2.17
PVT1-204ENST00000517525 NSUN6Q8TEA1 469 aaKnown RBP28.58■■■□□ 2.17
PVT1-204ENST00000517525 IWS1Q96ST2 819 aa28.58■■■□□ 2.17
PVT1-204ENST00000517525 GNASQ5JWF2 1037 aa28.57■■■□□ 2.16
PVT1-204ENST00000517525 EEPD1Q7L9B9 569 aa28.57■■■□□ 2.16
PVT1-204ENST00000517525 COL20A1Q9P218 1284 aa28.57■■■□□ 2.16
PVT1-204ENST00000517525 REC8O95072 547 aa28.56■■■□□ 2.16
PVT1-204ENST00000517525 HMGB1P09429 215 aaKnown RBP28.56■■■□□ 2.16
PVT1-204ENST00000517525 TRIM60Q495X7 471 aa28.56■■■□□ 2.16
PVT1-204ENST00000517525 NFXL1Q6ZNB6 911 aa28.56■■■□□ 2.16
PVT1-204ENST00000517525 TLK2Q86UE8 772 aa28.56■■■□□ 2.16
PVT1-204ENST00000517525 TOX2Q96NM4 488 aa28.56■■■□□ 2.16
PVT1-204ENST00000517525 TAAR1Q96RJ0 339 aa28.56■■■□□ 2.16
PVT1-204ENST00000517525 AP5M1Q9H0R1 490 aa28.56■■■□□ 2.16
PVT1-204ENST00000517525 NKRFO15226 690 aaKnown RBP eCLIP28.55■■■□□ 2.168e-7■■□□□ 12.5
PVT1-204ENST00000517525 ASGR1P07306 291 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 SYN1P17600 705 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 HSPA4P34932 840 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 ANKRD33Q7Z3H0 272 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 SCFD2Q8WU76 684 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 GLT1D1Q96MS3 346 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 WDR11Q9BZH6 1224 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 STARD7Q9NQZ5 370 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 ATP11BQ9Y2G3 1177 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 SLC12A7Q9Y666 1083 aa28.55■■■□□ 2.16
PVT1-204ENST00000517525 CABYRO75952 493 aa28.54■■■□□ 2.16
PVT1-204ENST00000517525 MAGEA10P43363 369 aaPredicted RBP28.54■■■□□ 2.16
PVT1-204ENST00000517525 IRX5P78411 483 aaPredicted RBP28.54■■■□□ 2.16
PVT1-204ENST00000517525 ADCK5Q3MIX3 580 aa28.54■■■□□ 2.16
PVT1-204ENST00000517525 NOL8Q76FK4 1167 aaKnown RBP28.54■■■□□ 2.16
PVT1-204ENST00000517525 HOMER1Q86YM7 354 aa28.54■■■□□ 2.16
PVT1-204ENST00000517525 RMDN3Q96TC7 470 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms