RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 GJA8P48165 433 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 PRR5P85299 388 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 HDLBPQ00341 1268 aaKnown RBP4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 GRB10Q13322 594 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 POMZP3Q6PJE2 187 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 LZTR1Q8N653 840 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 LINC01356Q8N9X3 169 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ALG3Q92685 438 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 RCC1LQ96I51 464 aaKnown RBP4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 C20orf173Q96LM9 149 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 APBA2Q99767 749 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 TGIF2Q9GZN2 237 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 EPB41L4AQ9HCS5 686 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 CGGBP1Q9UFW8 167 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 AKT3Q9Y243 479 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 IRS2Q9Y4H2 1338 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NPHP3-ACAD11A0A0J9YXS1 232 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NPHS1O60500 1241 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 LIMS1P48059 325 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 CASP7P55210 303 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 FOXO4P98177 505 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 VPS37DQ86XT2 251 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 CPNE8Q86YQ8 564 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ZDHHC14Q8IZN3 488 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ARHGEF39Q8N4T4 335 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 PPP1R14AQ96A00 147 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 SHDQ96IW2 340 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 RNF38Q9H0F5 515 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 CCSER2Q9H7U1 834 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 RWDD3Q9Y3V2 267 aa4.75□□□□□ -1.65
RNU6-1088P-201ENST00000516850 OTOL1A6NHN0 477 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 FOXD2O60548 495 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ZBTB7AO95365 584 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 SYN1P17600 705 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 KCNC1P48547 511 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ZNF143P52747 638 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 CAP1Q01518 475 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NETO2Q8NC67 525 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 FEZF2Q8TBJ5 459 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 KLHL6Q8WZ60 621 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ANAPC16Q96DE5 110 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 PEX11GQ96HA9 241 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 LUC7LQ9NQ29 371 aaKnown RBP4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 SUSD2Q9UGT4 822 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 PMF1-BGLAPU3KQ54 211 aa4.74□□□□□ -1.65
RNU6-1088P-201ENST00000516850 A0A0G2JLL6 359 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 KCNH1O95259 989 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 GLI4P10075 376 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 IGFBP6P24592 240 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 TRIM26Q12899 539 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 SLC9A5Q14940 896 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NCAPHQ15003 741 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 BVESQ8NE79 360 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 MCMBPQ9BTE3 642 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 XYLT2Q9H1B5 865 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ACBD3Q9H3P7 528 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 CAPN10Q9HC96 672 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 RTEL1Q9NZ71 1219 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 GULP1Q9UBP9 304 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 HCFC2Q9Y5Z7 792 aa4.73□□□□□ -1.65
RNU6-1088P-201ENST00000516850 SSBP05455 408 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU6-1088P-201ENST00000516850 BUD31P41223 144 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1088P-201ENST00000516850 TSPAN17Q96FV3 270 aa4.72□□□□□ -1.65
RNU6-1088P-201ENST00000516850 RXFP1Q9HBX9 757 aa4.72□□□□□ -1.65
RNU6-1088P-201ENST00000516850 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU6-1088P-201ENST00000516850 C7orf72A4D263 438 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FUCA1P04066 466 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ASGR2P07307 311 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SCRN1Q12765 414 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 GNL2Q13823 731 aaKnown RBP4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 WWC2Q6AWC2 1192 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CXorf38Q8TB03 319 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FNIP1Q8TF40 1166 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 AP5M1Q9H0R1 490 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 USP40Q9NVE5 1235 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CLEC1BQ9P126 229 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 LRP2BPQ9P2M1 347 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 EMC9Q9Y3B6 208 aa4.71□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FFAR3O14843 346 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 NTRK1P04629 796 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CELA3BP08861 270 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PLS3P13797 630 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ATF2P15336 505 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ATF4P18848 351 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PMLP29590 882 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SLURP1P55000 103 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SV2CQ496J9 727 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TNNI3KQ59H18 835 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 IQCEQ6IPM2 695 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TTLL7Q6ZT98 887 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FRMD5Q7Z6J6 570 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 DCP2Q8IU60 420 aaKnown RBP4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FAM169BQ8N8A8 192 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SYT8Q8NBV8 401 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TEPSINQ96N21 525 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MMP19Q99542 508 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 GPRC5CQ9NQ84 441 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CYP26B1Q9NR63 512 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms