RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 CYP46A1Q9Y6A2 500 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 KLF18A0A0U1RQI7 1052 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 OPLAHO14841 1288 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 ANAPC15P60006 121 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 GHRHRQ02643 423 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 APOBRQ0VD83 1088 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 TMTC3Q6ZXV5 915 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 MICU3Q86XE3 530 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 IL17RAQ96F46 866 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 KATNBL1Q9H079 304 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 RBM28Q9NW13 759 aaKnown RBP12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 BAZ2BQ9UIF8 2168 aaKnown RBP12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 FAM184BQ9ULE4 1060 aa12.92□□□□□ -0.34
SCARNA20-201ENST00000516768 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 AKR1A1P14550 325 aa12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 HSD17B4P51659 736 aa12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 FUT2Q10981 343 aa12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 ARRDC4Q8NCT1 418 aa12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 SYTL5Q8TDW5 730 aaPredicted RBP12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 TAAR1Q96RJ0 339 aa12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 MKI67P46013 3256 aaKnown RBP12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 RBBP6Q7Z6E9 1792 aaKnown RBP12.91□□□□□ -0.34
SCARNA20-201ENST00000516768 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 B4DLN1 442 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 CFBP00751 764 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 EDNRBP24530 442 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 CDC27P30260 824 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 MRPL12P52815 198 aaKnown RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 TOB2Q14106 344 aaPredicted RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 RTN1Q16799 776 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 CCDC144BQ3MJ40 725 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 C8orf34Q49A92 452 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 ANO1Q5XXA6 986 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 IQSEC1Q6DN90 963 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 TAPT1Q6NXT6 567 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 NECAB2Q7Z6G3 386 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 NSUN6Q8TEA1 469 aaKnown RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 UPF3BQ9BZI7 483 aaKnown RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 COL20A1Q9P218 1284 aa12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 V9GY48 417 aaPredicted RBP12.9□□□□□ -0.34
SCARNA20-201ENST00000516768 PLXNA1Q9UIW2 1896 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 GOLGA8AA7E2F4 631 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 RARBP10826 455 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 COL6A1P12109 1028 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 DIS3LQ8TF46 1054 aaKnown RBP12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 ZNF274Q96GC6 653 aaPredicted RBP12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 IWS1Q96ST2 819 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 NAP1L2Q9ULW6 460 aaPredicted RBP12.89□□□□□ -0.35
SCARNA20-201ENST00000516768 hCG_1642624A0A1W2PR95 340 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 GCOM1H8Y6P7 765 aaPredicted RBP12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 POLR2MP0CAP2 368 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 TNFAIP2Q03169 654 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 LRRC41Q15345 812 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 GJC2Q5T442 439 aaPredicted RBP12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 MPHOSPH6Q99547 160 aaKnown RBP12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 C11orf49Q9H6J7 331 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 PDGFCQ9NRA1 345 aa12.88□□□□□ -0.35
SCARNA20-201ENST00000516768 RBM47A0AV96 593 aaKnown RBP12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 DNM1LO00429 736 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 MEIS2O14770 477 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 ADCY6O43306 1168 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 PGK1P00558 417 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 NR3C2P08235 984 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 NKX3-2P78367 333 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 PDE4DQ08499 809 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 NTRK3Q16288 839 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 ARHGEF16Q5VV41 709 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 PSTPIP2Q9H939 334 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 GNEQ9Y223 722 aaKnown RBP12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 Q9Y3F1 56 aa12.87□□□□□ -0.35
SCARNA20-201ENST00000516768 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 PIK3CDO00329 1044 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 ADAMTS4O75173 837 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 SMPD1P17405 629 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 ADCYAP1R1P41586 468 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms