RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 SYN1P17600 705 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 FBLN1P23142 703 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 NASPP49321 788 aaPredicted RBP4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 VMACQ2NL98 169 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 LZTR1Q8N653 840 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 KLHL6Q8WZ60 621 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 FGD4Q96M96 766 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 MCMBPQ9BTE3 642 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 STRIP2Q9ULQ0 834 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 FAN1Q9Y2M0 1017 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 SUGT1Q9Y2Z0 365 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 BACE2Q9Y5Z0 518 aa4.99□□□□□ -1.61
RNU4-49P-201ENST00000516080 NPHP3-ACAD11A0A0J9YXS1 232 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 ZC3H12DA2A288 527 aaKnown RBP4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 ANKRD34BA5PLL1 514 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 OTOL1A6NHN0 477 aaPredicted RBP4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 VAMP4O75379 141 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 NAT2P11245 290 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 NCAM1P13591 858 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 PAMP19021 973 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 BUD31P41223 144 aaPredicted RBP4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 LIMS1P48059 325 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 SLC9A5Q14940 896 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 DPY19L1Q2PZI1 675 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 C9orf131Q5VYM1 1079 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 POMZP3Q6PJE2 187 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 CRACR2BQ8N4Y2 399 aaPredicted RBP4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 CXorf38Q8TB03 319 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 MRRFQ96E11 262 aaKnown RBP4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 PEX11GQ96HA9 241 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 TGIF2Q9GZN2 237 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 NUDT5Q9UKK9 219 aa4.98□□□□□ -1.61
RNU4-49P-201ENST00000516080 ZNF143P52747 638 aaPredicted RBP4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 FOXO4P98177 505 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 TRIM26Q12899 539 aaPredicted RBP4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 NCAPHQ15003 741 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 KIAA1211LQ6NV74 962 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 VHLLQ6RSH7 139 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 NETO2Q8NC67 525 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 FEZF2Q8TBJ5 459 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 ALG3Q92685 438 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 TSPAN17Q96FV3 270 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 TEPSINQ96N21 525 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 APBA2Q99767 749 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 SUSD2Q9UGT4 822 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 AKT3Q9Y243 479 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 INPP5FQ9Y2H2 1132 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 HCFC2Q9Y5Z7 792 aa4.97□□□□□ -1.61
RNU4-49P-201ENST00000516080 FFAR3O14843 346 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 NPHS1O60500 1241 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 ZBTB7AO95365 584 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 ASGR2P07307 311 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 ATF2P15336 505 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 KCNC1P48547 511 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 FRMD5Q7Z6J6 570 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 B3GNT8Q7Z7M8 397 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 ZDHHC14Q8IZN3 488 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 TP53I13Q8NBR0 393 aaPredicted RBP4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 SYT8Q8NBV8 401 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 USP33Q8TEY7 942 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 FNIP1Q8TF40 1166 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 MTA3Q9BTC8 594 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 CCSER2Q9H7U1 834 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 RWDD3Q9Y3V2 267 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 PMF1-BGLAPU3KQ54 211 aa4.96□□□□□ -1.62
RNU4-49P-201ENST00000516080 NOP56O00567 594 aaKnown RBP4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 SLURP1P55000 103 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 SAPCD2Q86UD0 394 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 CPNE8Q86YQ8 564 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 HOMEZQ8IX15 550 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 ZNF513Q8N8E2 541 aaPredicted RBP4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 BVESQ8NE79 360 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 CPA5Q8WXQ8 436 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 KIAA1522Q9P206 1035 aaPredicted RBP4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 GULP1Q9UBP9 304 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 EMC9Q9Y3B6 208 aa4.95□□□□□ -1.62
RNU4-49P-201ENST00000516080 PPP1R11O60927 126 aaPredicted RBP4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 KCNH1O95259 989 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 CELA3BP08861 270 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 PMLP29590 882 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 HTRA3P83110 453 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 WWC2Q6AWC2 1192 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 LIPIQ6XZB0 460 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 FAM169BQ8N8A8 192 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 COPS5Q92905 334 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 ANAPC16Q96DE5 110 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 MMP19Q99542 508 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 ACBD3Q9H3P7 528 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 APEX2Q9UBZ4 518 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 PLA2G2DQ9UNK4 145 aa4.94□□□□□ -1.62
RNU4-49P-201ENST00000516080 C7orf72A4D263 438 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 SH3D21A4FU49 640 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 PLA2G1BP04054 148 aaKnown RBP4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 CACNB2Q08289 660 aaPredicted RBP4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 VWA3BQ502W6 1294 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 RXFP1Q9HBX9 757 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms