RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 RWDD3Q9Y3V2 267 aa6.7□□□□□ -1.34
LINC01088-211ENST00000515597 VAMP4O75379 141 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 ASGR2P07307 311 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 GLI4P10075 376 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 CAP1Q01518 475 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 PAK2Q13177 524 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 RTP5Q14D33 572 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 GNPTABQ3T906 1256 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 RCSD1Q6JBY9 416 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 LIPIQ6XZB0 460 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 ZNF654Q8IZM8 581 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 RGS22Q8NE09 1264 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 ZNF526Q8TF50 670 aaPredicted RBP6.69□□□□□ -1.34
LINC01088-211ENST00000515597 FGD4Q96M96 766 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 KLHL25Q9H0H3 589 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 WHRNQ9P202 907 aa6.69□□□□□ -1.34
LINC01088-211ENST00000515597 A0A087WZG4 1122 aa6.68□□□□□ -1.34
LINC01088-211ENST00000515597 AURKAO14965 403 aa6.68□□□□□ -1.34
LINC01088-211ENST00000515597 EPHX1P07099 455 aa6.68□□□□□ -1.34
LINC01088-211ENST00000515597 HTRA3P83110 453 aa6.68□□□□□ -1.34
LINC01088-211ENST00000515597 COL9A2Q14055 689 aaPredicted RBP6.68□□□□□ -1.34
LINC01088-211ENST00000515597 HEATR6Q6AI08 1181 aaKnown RBP6.68□□□□□ -1.34
LINC01088-211ENST00000515597 RNF38Q9H0F5 515 aa6.68□□□□□ -1.34
LINC01088-211ENST00000515597 KIAA1522Q9P206 1035 aaPredicted RBP6.68□□□□□ -1.34
LINC01088-211ENST00000515597 EFR3BQ9Y2G0 817 aa6.68□□□□□ -1.34
LINC01088-211ENST00000515597 DIS3Q9Y2L1 958 aaKnown RBP6.68□□□□□ -1.34
LINC01088-211ENST00000515597 NCAM1P13591 858 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 PMLP29590 882 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 HDLBPQ00341 1268 aaKnown RBP6.67□□□□□ -1.34
LINC01088-211ENST00000515597 NT5DC1Q5TFE4 455 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 EEF1DP3Q658K8 133 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 SAPCD2Q86UD0 394 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 GGNQ86UU5 652 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 CABP7Q86V35 215 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 CPNE8Q86YQ8 564 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 NLGN2Q8NFZ4 835 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 CRBNQ96SW2 442 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 GBP3Q9H0R5 595 aa6.67□□□□□ -1.34
LINC01088-211ENST00000515597 CGGBP1Q9UFW8 167 aaPredicted RBP6.67□□□□□ -1.34
LINC01088-211ENST00000515597 UNCXA6NJT0 531 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 PPP1R11O60927 126 aaPredicted RBP6.66□□□□□ -1.34
LINC01088-211ENST00000515597 EIF6P56537 245 aaKnown RBP6.66□□□□□ -1.34
LINC01088-211ENST00000515597 PLP2Q04941 152 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 DLX2Q07687 328 aaPredicted RBP6.66□□□□□ -1.34
LINC01088-211ENST00000515597 DBX2Q6ZNG2 339 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 ADAT2Q7Z6V5 191 aaKnown RBP6.66□□□□□ -1.34
LINC01088-211ENST00000515597 B3GNT8Q7Z7M8 397 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 LZTR1Q8N653 840 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 RASGRP4Q8TDF6 673 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 SPATA32Q96LK8 384 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 PHAXQ9H814 394 aaKnown RBP6.66□□□□□ -1.34
LINC01088-211ENST00000515597 USP40Q9NVE5 1235 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 GULP1Q9UBP9 304 aa6.66□□□□□ -1.34
LINC01088-211ENST00000515597 A0A1W2PQH9 124 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 SH3D21A4FU49 640 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 SEPHS1P49903 392 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 SLC7A5Q01650 507 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 FERMT3Q86UX7 667 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 NT5DC4Q86YG4 428 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 KLHL6Q8WZ60 621 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 TSPAN17Q96FV3 270 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 NOX5Q96PH1 765 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 BACE2Q9Y5Z0 518 aa6.65□□□□□ -1.34
LINC01088-211ENST00000515597 C2orf71A6NGG8 1288 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 PPM1BO75688 479 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 ADRB1P08588 477 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 SOX9P48436 509 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 AMPD2Q01433 879 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 EFEMP1Q12805 493 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 UBXN11Q5T124 520 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 SMARCC2Q8TAQ2 1214 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 SLC12A7Q9Y666 1083 aa6.64□□□□□ -1.35
LINC01088-211ENST00000515597 GJA8P48165 433 aa6.63□□□□□ -1.35
LINC01088-211ENST00000515597 GIPRP48546 466 aa6.63□□□□□ -1.35
LINC01088-211ENST00000515597 WWC2Q6AWC2 1192 aa6.63□□□□□ -1.35
LINC01088-211ENST00000515597 C19orf47Q8N9M1 422 aaKnown RBP6.63□□□□□ -1.35
LINC01088-211ENST00000515597 GPRASP2Q96D09 838 aa6.63□□□□□ -1.35
LINC01088-211ENST00000515597 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.63□□□□□ -1.35
LINC01088-211ENST00000515597 SUGT1Q9Y2Z0 365 aa6.63□□□□□ -1.35
LINC01088-211ENST00000515597 SIT1Q9Y3P8 196 aa6.63□□□□□ -1.35
LINC01088-211ENST00000515597 NPHP3-ACAD11A0A0J9YXS1 232 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 PAMP19021 973 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 PPP2R5EQ16537 467 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 SPATS1Q496A3 300 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 CARFQ8N187 725 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 ARHGEF39Q8N4T4 335 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 NETO2Q8NC67 525 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 USP33Q8TEY7 942 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 DDX1Q92499 740 aaKnown RBP6.62□□□□□ -1.35
LINC01088-211ENST00000515597 PEX11GQ96HA9 241 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 APEX2Q9UBZ4 518 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 NUDT5Q9UKK9 219 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 DUSP10Q9Y6W6 482 aa6.62□□□□□ -1.35
LINC01088-211ENST00000515597 GRB10Q13322 594 aa6.61□□□□□ -1.35
LINC01088-211ENST00000515597 ZFYVE27Q5T4F4 411 aa6.61□□□□□ -1.35
LINC01088-211ENST00000515597 C9orf131Q5VYM1 1079 aa6.61□□□□□ -1.35
LINC01088-211ENST00000515597 MBLAC2Q68D91 279 aa6.61□□□□□ -1.35
LINC01088-211ENST00000515597 TGIF2Q9GZN2 237 aa6.61□□□□□ -1.35
LINC01088-211ENST00000515597 CLEC1BQ9P126 229 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms