RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
SERF1B-208ENST00000515588 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
SERF1B-208ENST00000515588 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
SERF1B-208ENST00000515588 C7orf61Q8IZ16 206 aa18.3■□□□□ 0.52
SERF1B-208ENST00000515588 SYTL5Q8TDW5 730 aaPredicted RBP18.3■□□□□ 0.52
SERF1B-208ENST00000515588 AMNQ9BXJ7 453 aa18.3■□□□□ 0.52
SERF1B-208ENST00000515588 ADD3Q9UEY8 706 aaKnown RBP18.3■□□□□ 0.52
SERF1B-208ENST00000515588 MRPL11Q9Y3B7 192 aaKnown RBP18.3■□□□□ 0.52
SERF1B-208ENST00000515588 NR2E3Q9Y5X4 410 aa18.3■□□□□ 0.52
SERF1B-208ENST00000515588 MYADML2A6NDP7 307 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 KBTBD13C9JR72 458 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 PTGS1P23219 599 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 EDNRBP24530 442 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 ADCYAP1R1P41586 468 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 ATN1P54259 1190 aaPredicted RBP18.29■□□□□ 0.52
SERF1B-208ENST00000515588 TMEM63BQ5T3F8 832 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 PHF24Q9UPV7 400 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 SNX14Q9Y5W7 946 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 LRRC37A2A6NM11 1700 aa18.29■□□□□ 0.52
SERF1B-208ENST00000515588 MYH6P13533 1939 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 LOC102724159A0A0B4J2E5 919 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 REC8O95072 547 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 KRT32Q14532 448 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 PWP2Q15269 919 aaKnown RBP18.28■□□□□ 0.52
SERF1B-208ENST00000515588 CCSAPQ6IQ19 270 aaPredicted RBP18.28■□□□□ 0.52
SERF1B-208ENST00000515588 RNF180Q86T96 592 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 MCF2L2Q86YR7 1114 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 CTCFLQ8NI51 663 aaPredicted RBP18.28■□□□□ 0.52
SERF1B-208ENST00000515588 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 FERMT2Q96AC1 680 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 TAAR1Q96RJ0 339 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 MAF1Q9H063 256 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 UPF3AQ9H1J1 476 aaKnown RBP18.28■□□□□ 0.52
SERF1B-208ENST00000515588 PCDH10Q9P2E7 1040 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 GNEQ9Y223 722 aaKnown RBP18.28■□□□□ 0.52
SERF1B-208ENST00000515588 PCDHA1Q9Y5I3 950 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 SLC12A7Q9Y666 1083 aa18.28■□□□□ 0.52
SERF1B-208ENST00000515588 PNMA6FA0A0J9YX94 578 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 CTAGE5O15320 804 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 CPA1P15085 419 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 SMPD1P17405 629 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 KIF5BP33176 963 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 TNFAIP2Q03169 654 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 CMTR1Q8N1G2 835 aaKnown RBP18.27■□□□□ 0.52
SERF1B-208ENST00000515588 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.52
SERF1B-208ENST00000515588 SPZ1Q9BXG8 430 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 VTA1Q9NP79 307 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 BRPF3Q9ULD4 1205 aa18.27■□□□□ 0.52
SERF1B-208ENST00000515588 ZMYND8Q9ULU4 1186 aaPredicted RBP18.27■□□□□ 0.52
SERF1B-208ENST00000515588 SMARCA1P28370 1054 aa18.26■□□□□ 0.51
SERF1B-208ENST00000515588 HSD17B4P51659 736 aa18.26■□□□□ 0.51
SERF1B-208ENST00000515588 GJA9P57773 515 aa18.26■□□□□ 0.51
SERF1B-208ENST00000515588 GHRHRQ02643 423 aa18.26■□□□□ 0.51
SERF1B-208ENST00000515588 SLC39A5Q6ZMH5 540 aa18.26■□□□□ 0.51
SERF1B-208ENST00000515588 FANCBQ8NB91 859 aa18.26■□□□□ 0.51
SERF1B-208ENST00000515588 JAKMIP1Q96N16 626 aaKnown RBP18.26■□□□□ 0.51
SERF1B-208ENST00000515588 A0A1W2PQ45 241 aaPredicted RBP18.25■□□□□ 0.51
SERF1B-208ENST00000515588 A0A1W2PQY0 241 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 CFBP00751 764 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
SERF1B-208ENST00000515588 CALM1P0DP23 149 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 CALM2P0DP24 149 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 CALM3P0DP25 149 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 CST5P28325 142 aaPredicted RBP18.25■□□□□ 0.51
SERF1B-208ENST00000515588 GNAQP50148 359 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 NKX3-2P78367 333 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 PDE4DQ08499 809 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 SNX17Q15036 470 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 KCNA10Q16322 511 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 IQSEC1Q6DN90 963 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 APOA5Q6Q788 366 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
SERF1B-208ENST00000515588 MICU3Q86XE3 530 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 LZTS2Q9BRK4 669 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 TSEN34Q9BSV6 310 aaKnown RBP18.25■□□□□ 0.51
SERF1B-208ENST00000515588 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
SERF1B-208ENST00000515588 COLQQ9Y215 455 aaPredicted RBP18.25■□□□□ 0.51
SERF1B-208ENST00000515588 RBM47A0AV96 593 aaKnown RBP18.24■□□□□ 0.51
SERF1B-208ENST00000515588 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
SERF1B-208ENST00000515588 SYN1P17600 705 aa18.24■□□□□ 0.51
SERF1B-208ENST00000515588 HOXA13P31271 388 aaPredicted RBP18.24■□□□□ 0.51
SERF1B-208ENST00000515588 ACLYP53396 1101 aa18.24■□□□□ 0.51
SERF1B-208ENST00000515588 RTP1P59025 263 aa18.24■□□□□ 0.51
SERF1B-208ENST00000515588 CHRDL2Q6WN34 429 aa18.24■□□□□ 0.51
SERF1B-208ENST00000515588 TMTC3Q6ZXV5 915 aa18.24■□□□□ 0.51
SERF1B-208ENST00000515588 NSUN6Q8TEA1 469 aaKnown RBP18.24■□□□□ 0.51
SERF1B-208ENST00000515588 RRP36Q96EU6 259 aaKnown RBP18.24■□□□□ 0.51
SERF1B-208ENST00000515588 RMDN3Q96TC7 470 aa18.24■□□□□ 0.51
SERF1B-208ENST00000515588 PRO3102Q9H379 93 aa18.24■□□□□ 0.51
SERF1B-208ENST00000515588 DYNC1LI2O43237 492 aaPredicted RBP18.23■□□□□ 0.51
SERF1B-208ENST00000515588 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
SERF1B-208ENST00000515588 BEX3Q00994 111 aa18.23■□□□□ 0.51
SERF1B-208ENST00000515588 DUSP28Q4G0W2 176 aa18.23■□□□□ 0.51
SERF1B-208ENST00000515588 GNASQ5JWF2 1037 aa18.23■□□□□ 0.51
SERF1B-208ENST00000515588 TLK2Q86UE8 772 aa18.23■□□□□ 0.51
SERF1B-208ENST00000515588 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
SERF1B-208ENST00000515588 WDR11Q9BZH6 1224 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms