RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 LZTS2Q9BRK4 669 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 SPZ1Q9BXG8 430 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 VTA1Q9NP79 307 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 ADAMTS4O75173 837 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 EDNRBP24530 442 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 CST5P28325 142 aaPredicted RBP14.84□□□□□ -0.03
CLCN3-210ENST00000515420 NKX3-2P78367 333 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 CCDC144BQ3MJ40 725 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 ANO1Q5XXA6 986 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 NUP133Q8WUM0 1156 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 TSEN34Q9BSV6 310 aaKnown RBP14.84□□□□□ -0.03
CLCN3-210ENST00000515420 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 SLC12A7Q9Y666 1083 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 DNAH12Q6ZR08 3092 aa14.84□□□□□ -0.03
CLCN3-210ENST00000515420 PNMA6FA0A0J9YX94 578 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 CYTH3O43739 400 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 CALML3P27482 149 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 RCAN1P53805 252 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 COL9A3Q14050 684 aaPredicted RBP14.83□□□□□ -0.04
CLCN3-210ENST00000515420 SLC35G1Q2M3R5 365 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 ADCK5Q3MIX3 580 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 GJC2Q5T442 439 aaPredicted RBP14.83□□□□□ -0.04
CLCN3-210ENST00000515420 UPF3AQ9H1J1 476 aaKnown RBP14.83□□□□□ -0.04
CLCN3-210ENST00000515420 GPHNQ9NQX3 736 aaPredicted RBP14.83□□□□□ -0.04
CLCN3-210ENST00000515420 PHF24Q9UPV7 400 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 PCDHA1Q9Y5I3 950 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 SYNRGQ9UMZ2 1314 aa14.83□□□□□ -0.04
CLCN3-210ENST00000515420 H0YGN5 161 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 PPP1R11O60927 126 aaPredicted RBP14.82□□□□□ -0.04
CLCN3-210ENST00000515420 HSD17B4P51659 736 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 GJA9P57773 515 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 C1orf53Q5VUE5 145 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 IQSEC1Q6DN90 963 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 SYNE3Q6ZMZ3 975 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 PIGSQ96S52 555 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 SENP6Q9GZR1 1112 aaPredicted RBP14.82□□□□□ -0.04
CLCN3-210ENST00000515420 SPC25Q9HBM1 224 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 Q9Y3F1 56 aa14.82□□□□□ -0.04
CLCN3-210ENST00000515420 MOXD2PA6NHM9 499 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 ADCY6O43306 1168 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 PGK1P00558 417 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 PSMA5P28066 241 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 TNFAIP2Q03169 654 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 SNX17Q15036 470 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 LRRC26Q2I0M4 334 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 TAPT1Q6NXT6 567 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 APOA5Q6Q788 366 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 HOMER1Q86YM7 354 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 FBXL16Q8N461 479 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 FANCBQ8NB91 859 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 PCSK9Q8NBP7 692 aaKnown RBP14.81□□□□□ -0.04
CLCN3-210ENST00000515420 KLHDC9Q8NEP7 349 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 SYTL5Q8TDW5 730 aaPredicted RBP14.81□□□□□ -0.04
CLCN3-210ENST00000515420 NSUN6Q8TEA1 469 aaKnown RBP14.81□□□□□ -0.04
CLCN3-210ENST00000515420 RRP36Q96EU6 259 aaKnown RBP14.81□□□□□ -0.04
CLCN3-210ENST00000515420 PURBQ96QR8 312 aaKnown RBP14.81□□□□□ -0.04
CLCN3-210ENST00000515420 IWS1Q96ST2 819 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 MYL10Q9BUA6 226 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 GNEQ9Y223 722 aaKnown RBP14.81□□□□□ -0.04
CLCN3-210ENST00000515420 SNX14Q9Y5W7 946 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 KIAA1217Q5T5P2 1943 aa14.81□□□□□ -0.04
CLCN3-210ENST00000515420 RBM47A0AV96 593 aaKnown RBP14.8□□□□□ -0.04
CLCN3-210ENST00000515420 OPLAHO14841 1288 aa14.8□□□□□ -0.04
CLCN3-210ENST00000515420 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
CLCN3-210ENST00000515420 PDE4DQ08499 809 aa14.8□□□□□ -0.04
CLCN3-210ENST00000515420 PPP2R5BQ15173 497 aa14.8□□□□□ -0.04
CLCN3-210ENST00000515420 CCSAPQ6IQ19 270 aaPredicted RBP14.8□□□□□ -0.04
CLCN3-210ENST00000515420 FBXO16Q8IX29 292 aaPredicted RBP14.8□□□□□ -0.04
CLCN3-210ENST00000515420 LENG1Q96BZ8 264 aaPredicted RBP14.8□□□□□ -0.04
CLCN3-210ENST00000515420 LRRC2Q9BYS8 371 aa14.8□□□□□ -0.04
CLCN3-210ENST00000515420 RBM28Q9NW13 759 aaKnown RBP14.8□□□□□ -0.04
CLCN3-210ENST00000515420 SEC63Q9UGP8 760 aaKnown RBP14.8□□□□□ -0.04
CLCN3-210ENST00000515420 NKRFO15226 690 aaKnown RBP eCLIP14.79□□□□□ -0.04
CLCN3-210ENST00000515420 CFBP00751 764 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 C6orf222P0C671 652 aaPredicted RBP14.79□□□□□ -0.04
CLCN3-210ENST00000515420 ADCYAP1R1P41586 468 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 BLOC1S2Q6QNY1 142 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 SLC39A5Q6ZMH5 540 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 TMTC3Q6ZXV5 915 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 TLK2Q86UE8 772 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 MICU3Q86XE3 530 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 C7orf61Q8IZ16 206 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 TBC1D5Q92609 795 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 JAKMIP1Q96N16 626 aaKnown RBP14.79□□□□□ -0.04
CLCN3-210ENST00000515420 RMDN3Q96TC7 470 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 USP26Q9BXU7 913 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 AGXT2Q9BYV1 514 aa14.79□□□□□ -0.04
CLCN3-210ENST00000515420 ELP1O95163 1332 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.78□□□□□ -0.04
CLCN3-210ENST00000515420 A0A1W2PQ45 241 aaPredicted RBP14.78□□□□□ -0.04
CLCN3-210ENST00000515420 A0A1W2PQY0 241 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 PLEKHA8P1O95397 391 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
CLCN3-210ENST00000515420 SMPD1P17405 629 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 ACLYP53396 1101 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 EEPD1Q7L9B9 569 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 SRBD1Q8N5C6 995 aaKnown RBP14.78□□□□□ -0.04
CLCN3-210ENST00000515420 SCFD2Q8WU76 684 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms