RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 FSCN2O14926 492 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 AOC2O75106 756 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 ULK1O75385 1050 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 TCEA3O75764 348 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 SCG5P05408 212 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 KCNA6P17658 529 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 LPOP22079 712 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 NTF4P34130 210 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 CAP2P40123 477 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 SMCPP49901 116 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 AFF1P51825 1210 aaKnown RBP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 FOXD4Q12950 439 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 KLF1Q13351 362 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 SAFBQ15424 915 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 SF1Q15637 639 aaKnown RBP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 ATP13A4Q4VNC1 1196 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 SLC35F1Q5T1Q4 408 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 MYRIPQ8NFW9 859 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 C1orf159Q96HA4 380 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 SIN3AQ96ST3 1273 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 NUP88Q99567 741 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-211ENST00000515289 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 GP6Q9HCN6 339 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 PRDM6Q9NQX0 595 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 C9orf84Q5VXU9 1444 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 CCDC141Q6ZP82 1450 aa8.45□□□□□ -1.06
NPHP3-211ENST00000515289 RASSF10A6NK89 507 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 GAS7O60861 476 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 RGS9O75916 674 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-211ENST00000515289 KCNH1O95259 989 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 BAG6P46379 1132 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 ZNF280AP59817 542 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-211ENST00000515289 ID3Q02535 119 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 COBLL1Q53SF7 1204 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 ABHD17CQ6PCB6 329 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 TXNDC11Q6PKC3 985 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 FCHSD1Q86WN1 690 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 NXPE1Q8N323 547 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 PUF60Q9UHX1 559 aaKnown RBP8.44□□□□□ -1.06
NPHP3-211ENST00000515289 ZBTB21Q9ULJ3 1066 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 TRAF6Q9Y4K3 522 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 KIAA1107Q9UPP5 1409 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 PZPP20742 1482 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 MAST1Q9Y2H9 1570 aa8.44□□□□□ -1.06
NPHP3-211ENST00000515289 C2CD2LO14523 706 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 GLRX3O76003 335 aaKnown RBP8.43□□□□□ -1.06
NPHP3-211ENST00000515289 MT-CO1P00395 513 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 CPP00450 1065 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 SNRPB2P08579 225 aaKnown RBP8.43□□□□□ -1.06
NPHP3-211ENST00000515289 BMP4P12644 408 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 VCAM1P19320 739 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 KCNJ6P48051 423 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 OCRLQ01968 901 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 AUHQ13825 339 aaKnown RBP8.43□□□□□ -1.06
NPHP3-211ENST00000515289 GRM3Q14832 879 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 GRIK5Q16478 980 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 GPR158Q5T848 1215 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 NBPF12Q5TAG4 269 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-211ENST00000515289 FOXR1Q6PIV2 292 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 TOGARAM2Q6ZUX3 1019 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 PCGF5Q86SE9 256 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 KCT2Q8NC54 265 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 ADCY4Q8NFM4 1077 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 DCAF4Q8WV16 495 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 AHCYL2Q96HN2 611 aaKnown RBP8.43□□□□□ -1.06
NPHP3-211ENST00000515289 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-211ENST00000515289 EMC7Q9NPA0 242 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 DDX21Q9NR30 783 aaKnown RBP eCLIP8.43□□□□□ -1.06
NPHP3-211ENST00000515289 MAN1C1Q9NR34 630 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 CYP26B1Q9NR63 512 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 PCDHA9Q9Y5H5 950 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 ANKRD30AQ9BXX3 1397 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 PLCH2O75038 1416 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 ASXL2Q76L83 1435 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 WDR7Q9Y4E6 1490 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 ARAP3Q8WWN8 1544 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 SYCP2Q9BX26 1530 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 ARHGEF12Q9NZN5 1544 aa8.43□□□□□ -1.06
NPHP3-211ENST00000515289 LOC100289279A0A1B0GTE1 492 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 APAF1O14727 1248 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 MAFGO15525 162 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 CFBP00751 764 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 LTFP02788 710 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 ITGA6P23229 1130 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 RNF4P78317 190 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 NKG7Q16617 165 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 ARHGAP29Q52LW3 1261 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 USP53Q70EK8 1073 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 C11orf74Q86VG3 221 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 PAF1Q8N7H5 531 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 KLHL23Q8NBE8 558 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 RNF214Q8ND24 703 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 C1orf162Q8NEQ5 155 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-211ENST00000515289 BRF1Q92994 677 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 GJA10Q969M2 543 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 USP26Q9BXU7 913 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 ANLNQ9NQW6 1124 aa8.42□□□□□ -1.06
NPHP3-211ENST00000515289 SWAP70Q9UH65 585 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms