RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ZNF772Q68DY9 489 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 BLIDQ8IZY5 108 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 PICK1Q9NRD5 415 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 NOVA2Q9UNW9 492 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 METP08581 1390 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 KIAA0232Q92628 1395 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TRPA1O75762 1119 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 KRT19P08727 400 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TECP42680 631 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 SLC1A4P43007 532 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TCIRG1Q13488 830 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ANKRD20A4Q4UJ75 823 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ANKRD20A8PQ5CZ79 823 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ANKRD20A2Q5SQ80 823 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ANKRD20A1Q5TYW2 823 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TBC1D1Q86TI0 1168 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TAB3Q8N5C8 712 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 SYMPKQ92797 1274 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 VTI1AQ96AJ9 217 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ST7Q9NRC1 585 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ZMYM6O95789 1325 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 YWHAGP61981 247 aaKnown RBP eCLIP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 PPWD1Q96BP3 646 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 SAAL1Q96ER3 474 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 GCC2Q8IWJ2 1684 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ABCC4O15439 1325 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 EIF3CLB5ME19 914 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 PGRMC1O00264 195 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TRIM37O94972 964 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TTC4O95801 387 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 INHBAP08476 426 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 CUL4BQ13620 913 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 SLC39A14Q15043 492 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 HADHQ16836 314 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TBC1D22AQ8WUA7 517 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 EIF3CQ99613 913 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 QTRT2Q9H974 415 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 IFT122Q9HBG6 1241 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 BAG5Q9UL15 447 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 GPC4O75487 556 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 TFAP4Q01664 338 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 GABPAQ06546 454 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 ADAM9Q13443 819 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 NIM1KQ8IY84 436 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 CARD10Q9BWT7 1032 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 SLC24A3Q9HC58 644 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 METTL14Q9HCE5 456 aaKnown RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 RNF14Q9UBS8 474 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 BIN2Q9UBW5 565 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-214ENST00000515035 SCINQ9Y6U3 715 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 GSTA1P08263 222 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 GSTA2P09210 222 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 CXCR5P32302 372 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 FNBP4Q8N3X1 1017 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-214ENST00000515035 SSH3Q8TE77 659 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 SCYL1Q96KG9 808 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 SOWAHDA6NJG2 315 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 TPH2Q8IWU9 490 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 CFAP65Q6ZU64 1925 aaKnown RBP14.48□□□□□ -0.09
TCOF1-214ENST00000515035 SCRN1Q12765 414 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 FAM26FQ5R3K3 315 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 ARHGEF10LQ9HCE6 1279 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 FAM135BQ49AJ0 1406 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 COBLO75128 1261 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 CNGA1P29973 690 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 SLCO1A2P46721 670 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 KRT81Q14533 505 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 CCHCR1Q8TD31 782 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 IWS1Q96ST2 819 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 DRC3Q9H069 523 aa14.48□□□□□ -0.09
TCOF1-214ENST00000515035 BZW2Q9Y6E2 419 aaKnown RBP14.48□□□□□ -0.09
TCOF1-214ENST00000515035 ZNF521Q96K83 1311 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 PDIA3P30101 505 aaKnown RBP14.47□□□□□ -0.09
TCOF1-214ENST00000515035 PDE6CP51160 858 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 PDCD2Q16342 344 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-214ENST00000515035 SPATA5Q8NB90 893 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 NSMCE1Q8WV22 266 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 ZMAT2Q96NC0 199 aaKnown RBP14.47□□□□□ -0.09
TCOF1-214ENST00000515035 TMOD4Q9NZQ9 345 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 TRPC6Q9Y210 931 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 OR52Z1P0C646 297 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 PTGDRQ13258 359 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 MESDQ14696 234 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 EXOC3L4Q17RC7 722 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 HAUS1Q96CS2 278 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 PANK4Q9NVE7 773 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 EPS15L1Q9UBC2 864 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 MAD1L1Q9Y6D9 718 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 MYCLP12524 364 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-214ENST00000515035 INPP1P49441 399 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 FAM47AQ5JRC9 791 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 CYP4F22Q6NT55 531 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 VSTM4Q8IW00 320 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-214ENST00000515035 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 N4BP1O75113 896 aaKnown RBP14.47□□□□□ -0.09
TCOF1-214ENST00000515035 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms