RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 TADA3O75528 432 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 FGFR1OPO95684 399 aaKnown RBP16.64■□□□□ 0.25
NUP54-217ENST00000514987 H2AFXP16104 143 aaPredicted RBP16.64■□□□□ 0.25
NUP54-217ENST00000514987 TXKP42681 527 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
NUP54-217ENST00000514987 FOXR2Q6PJQ5 311 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 ADGRF4Q8IZF3 695 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 CSGALNACT2Q8N6G5 542 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 OR8K1Q8NGG5 319 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 COA7Q96BR5 231 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 MTMR8Q96EF0 704 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 PLIN2Q99541 437 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 DESI2Q9BSY9 194 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 MMTAG2Q9BU76 263 aaKnown RBP16.64■□□□□ 0.25
NUP54-217ENST00000514987 GPCPD1Q9NPB8 672 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 TMEM260Q9NX78 707 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 MAPK8IP1Q9UQF2 711 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 MRFAP1Q9Y605 127 aa16.64■□□□□ 0.25
NUP54-217ENST00000514987 ZBTB5O15062 677 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 KRT9P35527 623 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 CRKP46108 304 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 CLK2P49760 499 aaKnown RBP16.63■□□□□ 0.25
NUP54-217ENST00000514987 PSMD2Q13200 908 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 MTF1Q14872 753 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 SEPT2Q15019 361 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 DOK7Q18PE1 504 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 ERCC6LQ2NKX8 1250 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 KRT79Q5XKE5 535 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 FBXO38Q6PIJ6 1188 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
NUP54-217ENST00000514987 ZNF507Q8TCN5 953 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 DCAF4Q8WV16 495 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 MKL1Q969V6 931 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 WDR24Q96S15 920 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 MRPL44Q9H9J2 332 aaKnown RBP16.63■□□□□ 0.25
NUP54-217ENST00000514987 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
NUP54-217ENST00000514987 CAPN11Q9UMQ6 739 aa16.63■□□□□ 0.25
NUP54-217ENST00000514987 LUC7L2Q9Y383 392 aaKnown RBP16.63■□□□□ 0.25
NUP54-217ENST00000514987 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
NUP54-217ENST00000514987 CCDC96Q2M329 555 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 STRIP1Q5VSL9 837 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 CREBRFQ8IUR6 639 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 ARID3AQ99856 593 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 DUSP9Q99956 384 aaKnown RBP16.62■□□□□ 0.25
NUP54-217ENST00000514987 CARD6Q9BX69 1037 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 NYAP2Q9P242 653 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 MYH4Q9Y623 1939 aa16.62■□□□□ 0.25
NUP54-217ENST00000514987 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
NUP54-217ENST00000514987 COBLO75128 1261 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 SCNN1DP51172 638 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 GRB10Q13322 594 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 ARHGAP29Q52LW3 1261 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 STYK1Q6J9G0 422 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 DNAJC7Q99615 494 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 TUBGCP2Q9BSJ2 902 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 IDI2Q9BXS1 227 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 ABCB11O95342 1321 aa16.61■□□□□ 0.25
NUP54-217ENST00000514987 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 FANCGO15287 622 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 MMP10P09238 476 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 TNNI2P48788 182 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 PMS1P54277 932 aaKnown RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 CBX1P83916 185 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 PPP2R3AQ06190 1150 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 FIGNQ5HY92 759 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 LARP4BQ92615 738 aaKnown RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 RAD54LQ92698 747 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 KDM3AQ9Y4C1 1321 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 BMS1Q14692 1282 aaKnown RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 TMEM119Q4V9L6 283 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 FKBP15Q5T1M5 1219 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 CENPPQ6IPU0 288 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 TRIM34Q9BYJ4 488 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 LZTFL1Q9NQ48 299 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 BLOC1S4Q9NUP1 217 aa16.6■□□□□ 0.25
NUP54-217ENST00000514987 ZNHIT6Q9NWK9 470 aaKnown RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 DDX25Q9UHL0 483 aaKnown RBP16.6■□□□□ 0.25
NUP54-217ENST00000514987 CTAGE9A4FU28 777 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 SLC37A4O43826 429 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 MARCH6O60337 910 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 TDP2O95551 362 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
NUP54-217ENST00000514987 MTIF2P46199 727 aaKnown RBP16.59■□□□□ 0.25
NUP54-217ENST00000514987 USP11P51784 963 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 ERVK-24P63145 666 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 LRRC63Q05C16 580 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 STK4Q13043 487 aa16.59■□□□□ 0.25
NUP54-217ENST00000514987 ZNF662Q6ZS27 426 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms