RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SLC8A3P57103 927 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 DPCR1Q3MIW9 517 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SHC4Q6S5L8 630 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 NANOGNBQ7Z5D8 188 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CEP57Q86XR8 500 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 AMOTL1Q8IY63 956 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 VPS37AQ8NEZ2 397 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SHISA4Q96DD7 197 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 ZKSCAN3Q9BRR0 538 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 UBXN6Q9BZV1 441 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 RSPH9Q9H1X1 276 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CNNM2Q9H8M5 875 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 KIAA1468Q9P260 1216 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 TRIM64CA6NLI5 447 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CEP104O60308 925 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CMA1P23946 247 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 DMPKQ09013 629 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 POSTNQ15063 836 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CAPRIN2Q6IMN6 1127 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 GALNT17Q6IS24 598 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 MFSD6Q6ZSS7 791 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 ANKRD13BQ86YJ7 626 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 DDX12PQ92771 950 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 HPS3Q969F9 1004 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 KRT23Q9C075 422 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 VPS18Q9P253 973 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SEL1LQ9UBV2 794 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 DNAI1Q9UI46 699 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 IFIT3O14879 490 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 PPP6R2O75170 966 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SEC31AO94979 1220 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 ZNF202O95125 648 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 IFNAR1P17181 557 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 IARSP41252 1262 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 NUBP1P53384 320 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 KRT72Q14CN4 511 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 RCN1Q15293 331 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SEC23AQ15436 765 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SKIDA1Q1XH10 827 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SMUG1Q53HV7 270 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 WLSQ5T9L3 541 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 TMCO5AQ8N6Q1 288 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CACTINQ8WUQ7 758 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SDR42E1Q8WUS8 393 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 BPIFA3Q9BQP9 254 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 CAPS2Q9BXY5 557 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 ANO10Q9NW15 660 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 KLHL42Q9P2K6 505 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 NUTM2BA6NNL0 878 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 NUTM2EB1AL46 878 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 LSM1O15116 133 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 FESP07332 822 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 RPL13P26373 211 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 KLRK1P26718 216 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 MARCKSP29966 332 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 INPP5BP32019 993 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 PPARAQ07869 468 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 OTUD6AQ7L8S5 288 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 C14orf80Q86SX3 495 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 NUTM2AQ8IVF1 878 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 SLF2Q8IX21 1173 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 ALS2CR12Q96Q35 445 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 OSBPL9Q96SU4 736 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 CDC5LQ99459 802 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 ZNF652Q9Y2D9 606 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC12A7Q9Y666 1083 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 NAV1Q8NEY1 1877 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 CFAP69A5D8W1 941 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 TOB1P50616 345 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 UBE4AQ14139 1066 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC10A5Q5PT55 438 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 AMIGO3Q86WK7 504 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 AOPEPQ8N6M6 819 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 CORO1BQ9BR76 489 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 BRD8Q9H0E9 1235 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 GINM1Q9NU53 330 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 LRP2BPQ9P2M1 347 aa8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 DDX60LQ5H9U9 1706 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-219ENST00000514743 CCDC69A6NI79 296 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 FGFR1OPO95684 399 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 MMP1P03956 469 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 ALOX15P16050 662 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CYP7A1P22680 504 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 PAPOLAP51003 745 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 HDAC4P56524 1084 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 NCAPHQ15003 741 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 ISM2Q6H9L7 571 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 PEX5LQ8IYB4 626 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 SPIRE2Q8WWL2 714 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CUL5Q93034 780 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms