RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 SCRN1Q12765 414 aa17.84■□□□□ 0.45
MATR3-239ENST00000514694 ME3Q16798 604 aa17.84■□□□□ 0.45
MATR3-239ENST00000514694 PRAMEF19Q5SWL8 479 aa17.84■□□□□ 0.45
MATR3-239ENST00000514694 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
MATR3-239ENST00000514694 GPKOWQ92917 476 aaPredicted RBP eCLIP17.84■□□□□ 0.45
MATR3-239ENST00000514694 TINF2Q9BSI4 451 aa17.84■□□□□ 0.45
MATR3-239ENST00000514694 UPF2Q9HAU5 1272 aaKnown RBP17.84■□□□□ 0.45
MATR3-239ENST00000514694 SEC63Q9UGP8 760 aaKnown RBP17.84■□□□□ 0.45
MATR3-239ENST00000514694 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
MATR3-239ENST00000514694 LCTP09848 1927 aa17.84■□□□□ 0.45
MATR3-239ENST00000514694 ZNFX1Q9P2E3 1918 aaKnown RBP17.83■□□□□ 0.44
MATR3-239ENST00000514694 PFKFB2O60825 505 aa17.83■□□□□ 0.44
MATR3-239ENST00000514694 SNAI1O95863 264 aaPredicted RBP17.83■□□□□ 0.44
MATR3-239ENST00000514694 PPP2R5BQ15173 497 aa17.83■□□□□ 0.44
MATR3-239ENST00000514694 WWC2Q6AWC2 1192 aa17.83■□□□□ 0.44
MATR3-239ENST00000514694 TRMT44Q8IYL2 757 aaKnown RBP17.83■□□□□ 0.44
MATR3-239ENST00000514694 NECAB1Q8N987 351 aa17.83■□□□□ 0.44
MATR3-239ENST00000514694 RGS22Q8NE09 1264 aa17.83■□□□□ 0.44
MATR3-239ENST00000514694 SYTL5Q8TDW5 730 aaPredicted RBP17.83■□□□□ 0.44
MATR3-239ENST00000514694 SLC5A4Q9NY91 659 aa17.83■□□□□ 0.44
MATR3-239ENST00000514694 CCDC196A0A1B0GTZ2 297 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 POTEFA5A3E0 1075 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 CYBAP13498 195 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 HOXA13P31271 388 aaPredicted RBP17.82■□□□□ 0.44
MATR3-239ENST00000514694 SOX10P56693 466 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 UBXN2AP68543 259 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 ST3GAL1Q11201 340 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 ANKRD1Q15327 319 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 PKN1Q16512 942 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 MFSD14CQ5VZR4 134 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 MAMDC4Q6UXC1 1216 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 HEATR3Q7Z4Q2 680 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 ZNF467Q7Z7K2 595 aaPredicted RBP17.82■□□□□ 0.44
MATR3-239ENST00000514694 SHISA4Q96DD7 197 aa17.82■□□□□ 0.44
MATR3-239ENST00000514694 CD2BP2O95400 341 aaKnown RBP17.81■□□□□ 0.44
MATR3-239ENST00000514694 CTDNEP1O95476 244 aa17.81■□□□□ 0.44
MATR3-239ENST00000514694 CFBP00751 764 aa17.81■□□□□ 0.44
MATR3-239ENST00000514694 IFNAR1P17181 557 aa17.81■□□□□ 0.44
MATR3-239ENST00000514694 HSD17B4P51659 736 aa17.81■□□□□ 0.44
MATR3-239ENST00000514694 GHRHRQ02643 423 aa17.81■□□□□ 0.44
MATR3-239ENST00000514694 TAAR1Q96RJ0 339 aa17.81■□□□□ 0.44
MATR3-239ENST00000514694 RNF208Q9H0X6 261 aa17.81■□□□□ 0.44
MATR3-239ENST00000514694 PAK6Q9NQU5 681 aaPredicted RBP17.81■□□□□ 0.44
MATR3-239ENST00000514694 KIAA0100Q14667 2235 aaKnown RBP17.8■□□□□ 0.44
MATR3-239ENST00000514694 PLXNA1Q9UIW2 1896 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 RPTORQ8N122 1335 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 STXBP3O00186 592 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 CAPN15O75808 1086 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 RABEP1Q15276 862 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 ARMCX2Q7L311 632 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 MCF2L2Q86YR7 1114 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 SLC26A6Q9BXS9 759 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 KATNBL1Q9H079 304 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.8■□□□□ 0.442e-11■■■□□ 18.4
MATR3-239ENST00000514694 SLKQ9H2G2 1235 aaPredicted RBP17.8■□□□□ 0.44
MATR3-239ENST00000514694 MYH6P13533 1939 aa17.8■□□□□ 0.44
MATR3-239ENST00000514694 SYNGAP1Q96PV0 1343 aa17.79■□□□□ 0.44
MATR3-239ENST00000514694 ADAMTS3O15072 1205 aa17.79■□□□□ 0.44
MATR3-239ENST00000514694 PRPF3O43395 683 aaKnown RBP17.79■□□□□ 0.44
MATR3-239ENST00000514694 ZNF865P0CJ78 1059 aaPredicted RBP17.79■□□□□ 0.44
MATR3-239ENST00000514694 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
MATR3-239ENST00000514694 PFKFB3Q16875 520 aaPredicted RBP17.79■□□□□ 0.44
MATR3-239ENST00000514694 USP17L6PQ6QN14 398 aa17.79■□□□□ 0.44
MATR3-239ENST00000514694 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
MATR3-239ENST00000514694 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
MATR3-239ENST00000514694 DEFB118Q96PH6 123 aa17.79■□□□□ 0.44
MATR3-239ENST00000514694 HMX1Q9NP08 348 aaPredicted RBP17.79■□□□□ 0.44
MATR3-239ENST00000514694 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.79■□□□□ 0.44
MATR3-239ENST00000514694 MKI67P46013 3256 aaKnown RBP17.78■□□□□ 0.44
MATR3-239ENST00000514694 MEIS2O14770 477 aa17.78■□□□□ 0.44
MATR3-239ENST00000514694 SCG2P13521 617 aa17.78■□□□□ 0.44
MATR3-239ENST00000514694 TRAF1Q13077 416 aa17.78■□□□□ 0.44
MATR3-239ENST00000514694 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
MATR3-239ENST00000514694 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
MATR3-239ENST00000514694 RNF26Q9BY78 433 aaPredicted RBP17.78■□□□□ 0.44
MATR3-239ENST00000514694 BARHL2Q9NY43 387 aa17.78■□□□□ 0.44
MATR3-239ENST00000514694 RBBP6Q7Z6E9 1792 aaKnown RBP17.77■□□□□ 0.44
MATR3-239ENST00000514694 GCOM1H8Y6P7 765 aaPredicted RBP17.77■□□□□ 0.44
MATR3-239ENST00000514694 CPLX1O14810 134 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 ADCY6O43306 1168 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 GJB1P08034 283 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 POLR2MP0CAP2 368 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 EN2P19622 333 aaPredicted RBP17.77■□□□□ 0.44
MATR3-239ENST00000514694 EDNRBP24530 442 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 UBE2SQ16763 222 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 ANO1Q5XXA6 986 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 LHX8Q68G74 356 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 LENG1Q96BZ8 264 aaPredicted RBP17.77■□□□□ 0.44
MATR3-239ENST00000514694 RMDN3Q96TC7 470 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 MAF1Q9H063 256 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.44
MATR3-239ENST00000514694 PTGS1P23219 599 aa17.76■□□□□ 0.43
MATR3-239ENST00000514694 CNGA1P29973 690 aa17.76■□□□□ 0.43
MATR3-239ENST00000514694 NAPAP54920 295 aa17.76■□□□□ 0.43
MATR3-239ENST00000514694 ACVR2BQ13705 512 aa17.76■□□□□ 0.43
MATR3-239ENST00000514694 TMEM63BQ5T3F8 832 aa17.76■□□□□ 0.43
MATR3-239ENST00000514694 FCHSD1Q86WN1 690 aa17.76■□□□□ 0.43
MATR3-239ENST00000514694 FBXO16Q8IX29 292 aaPredicted RBP17.76■□□□□ 0.43
MATR3-239ENST00000514694 DNERQ8NFT8 737 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms