RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 RAB27AP51159 221 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 LBX2Q6XYB7 198 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 IFNL3Q8IZI9 196 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 PCDH19Q8TAB3 1148 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 USP7Q93009 1102 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 MTMR8Q96EF0 704 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 WNK4Q96J92 1243 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 NACC1Q96RE7 527 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 CAMKK2Q96RR4 588 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
RFC1-216ENST00000514572 CELF4Q9BZC1 486 aaKnown RBP6.95□□□□□ -1.3
RFC1-216ENST00000514572 CCDC8Q9H0W5 538 aaPredicted RBP6.95□□□□□ -1.3
RFC1-216ENST00000514572 CDH19Q9H159 772 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 PCDHA8Q9Y5H6 950 aa6.95□□□□□ -1.3
RFC1-216ENST00000514572 TRAF5O00463 557 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 MEIS1O00470 390 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 MEFVO15553 781 aaPredicted RBP6.94□□□□□ -1.3
RFC1-216ENST00000514572 ZNF205O95201 554 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
RFC1-216ENST00000514572 TMPRSS15P98073 1019 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 KCNAB2Q13303 367 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 PIN1Q13526 163 aaPredicted RBP6.94□□□□□ -1.3
RFC1-216ENST00000514572 RTP2Q5QGT7 225 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 SYDE2Q5VT97 1194 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 DDX53Q86TM3 631 aaKnown RBP6.94□□□□□ -1.3
RFC1-216ENST00000514572 BEND7Q8N7W2 519 aaPredicted RBP6.94□□□□□ -1.3
RFC1-216ENST00000514572 CNTD1Q8N815 330 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 COG1Q8WTW3 980 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 CHMP4CQ96CF2 233 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 RTFDC1Q9BY42 306 aaPredicted RBP6.94□□□□□ -1.3
RFC1-216ENST00000514572 DUSP15Q9H1R2 295 aaPredicted RBP6.94□□□□□ -1.3
RFC1-216ENST00000514572 TRHDEQ9UKU6 1024 aa6.94□□□□□ -1.3
RFC1-216ENST00000514572 M0R2C6 588 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 PLS3P13797 630 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 VAV1P15498 845 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 ITKQ08881 620 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 CREB3L3Q68CJ9 461 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 CWF19L1Q69YN2 538 aaKnown RBP6.93□□□□□ -1.3
RFC1-216ENST00000514572 OGFOD3Q6PK18 319 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 PAOXQ6QHF9 649 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 MTDHQ86UE4 582 aaKnown RBP6.93□□□□□ -1.3
RFC1-216ENST00000514572 CCDC146Q8IYE0 955 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
RFC1-216ENST00000514572 MFSD4AQ8N468 514 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 TCTN2Q96GX1 697 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 MENTQ9BUN1 341 aa6.93□□□□□ -1.3
RFC1-216ENST00000514572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.3
RFC1-216ENST00000514572 E2F8A0AVK6 867 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 KIF3BO15066 747 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 ABLIM3O94929 683 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 CBX7O95931 251 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 LCP1P13796 627 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 RXRBP28702 533 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 ADMP35318 185 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 GNALP38405 381 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 SCNN1BP51168 640 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 INAVAQ3KP66 663 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 EEF1DP3Q658K8 133 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 CCSAPQ6IQ19 270 aaPredicted RBP6.92□□□□□ -1.3
RFC1-216ENST00000514572 BEND4Q6ZU67 534 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 PODNQ7Z5L7 613 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 GIMAP7Q8NHV1 300 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 MMP19Q99542 508 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
RFC1-216ENST00000514572 ZIM2Q9NZV7 527 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 B4GALT6Q9UBX8 382 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 GTF2IRD1Q9UHL9 959 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 SPEF1Q9Y4P9 236 aa6.92□□□□□ -1.3
RFC1-216ENST00000514572 CCDC180Q9P1Z9 1646 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 PRKD3O94806 890 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 NOP2P46087 812 aaKnown RBP6.91□□□□□ -1.3
RFC1-216ENST00000514572 LSSP48449 732 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 ERVK-21P61565 698 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 PAK1Q13153 545 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 NFKBIBQ15653 356 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 GAB4Q2WGN9 574 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 TMEM177Q53S58 311 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 MBLAC2Q68D91 279 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 NXNQ6DKJ4 435 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 OVCH1Q7RTY7 1134 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 ZAR1Q86SH2 424 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 CLEC10AQ8IUN9 316 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 NXPE1Q8N323 547 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 CHST14Q8NCH0 376 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 LINC00116Q8NCU8 138 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 RCBTB1Q8NDN9 531 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 SMAD5Q99717 465 aaKnown RBP6.91□□□□□ -1.3
RFC1-216ENST00000514572 FAM83CQ9BQN1 747 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 YIPF4Q9BSR8 244 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 CLEC1BQ9P126 229 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 COQ6Q9Y2Z9 468 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 RIPOR2Q9Y4F9 1068 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 U3KQE9 123 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 TNKSO95271 1327 aa6.91□□□□□ -1.3
RFC1-216ENST00000514572 WDR64B1ANS9 1081 aa6.9□□□□□ -1.3
RFC1-216ENST00000514572 FZD9O00144 591 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms