RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 SEC63Q9UGP8 760 aaKnown RBP16.15■□□□□ 0.18
USP46-209ENST00000514536 CFBP00751 764 aa16.14■□□□□ 0.17
USP46-209ENST00000514536 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
USP46-209ENST00000514536 PPP2R5BQ15173 497 aa16.14■□□□□ 0.17
USP46-209ENST00000514536 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
USP46-209ENST00000514536 CNPY2Q9Y2B0 182 aa16.14■□□□□ 0.17
USP46-209ENST00000514536 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
USP46-209ENST00000514536 V9GY48 417 aaPredicted RBP16.14■□□□□ 0.17
USP46-209ENST00000514536 SYNGAP1Q96PV0 1343 aa16.14■□□□□ 0.17
USP46-209ENST00000514536 BAZ2BQ9UIF8 2168 aaKnown RBP16.14■□□□□ 0.17
USP46-209ENST00000514536 CCDC196A0A1B0GTZ2 297 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 ASB14A6NK59 587 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 OPLAHO14841 1288 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 CCT2P78371 535 aaKnown RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 FUT2Q10981 343 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 ASTN1O14525 1302 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 ZNF865P0CJ78 1059 aaPredicted RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 NEK4P51957 841 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 LHX8Q68G74 356 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 SYTL5Q8TDW5 730 aaPredicted RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 SHISA4Q96DD7 197 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 TAAR1Q96RJ0 339 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 MAF1Q9H063 256 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 ALDH8A1Q9H2A2 487 aaPredicted RBP16.13■□□□□ 0.17
USP46-209ENST00000514536 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
USP46-209ENST00000514536 KIAA0100Q14667 2235 aaKnown RBP16.12■□□□□ 0.17
USP46-209ENST00000514536 MKI67P46013 3256 aaKnown RBP16.12■□□□□ 0.17
USP46-209ENST00000514536 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
USP46-209ENST00000514536 AK2P54819 239 aa16.12■□□□□ 0.17
USP46-209ENST00000514536 STK3Q13188 491 aa16.12■□□□□ 0.17
USP46-209ENST00000514536 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
USP46-209ENST00000514536 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
USP46-209ENST00000514536 CRISPLD2Q9H0B8 497 aa16.12■□□□□ 0.17
USP46-209ENST00000514536 NCOA5Q9HCD5 579 aaKnown RBP16.12■□□□□ 0.17
USP46-209ENST00000514536 COL20A1Q9P218 1284 aa16.12■□□□□ 0.17
USP46-209ENST00000514536 DDX20Q9UHI6 824 aaKnown RBP16.12■□□□□ 0.17
USP46-209ENST00000514536 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
USP46-209ENST00000514536 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
USP46-209ENST00000514536 SEPT4O43236 478 aa16.11■□□□□ 0.17
USP46-209ENST00000514536 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
USP46-209ENST00000514536 HSD17B4P51659 736 aa16.11■□□□□ 0.17
USP46-209ENST00000514536 ABHD16BQ9H3Z7 469 aa16.11■□□□□ 0.17
USP46-209ENST00000514536 BRCA2P51587 3418 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 GCOM1H8Y6P7 765 aaPredicted RBP16.1■□□□□ 0.17
USP46-209ENST00000514536 MSCO60682 206 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 POLR2MP0CAP2 368 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 NID2Q14112 1375 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 ANKRD1Q15327 319 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 NOL8Q76FK4 1167 aaKnown RBP16.1■□□□□ 0.17
USP46-209ENST00000514536 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 HEATR3Q7Z4Q2 680 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 SAMD3Q8N6K7 520 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 DNERQ8NFT8 737 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 MORC4Q8TE76 937 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
USP46-209ENST00000514536 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
USP46-209ENST00000514536 MAP3K20Q9NYL2 800 aaKnown RBP16.1■□□□□ 0.17
USP46-209ENST00000514536 OGDHLQ9ULD0 1010 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 TPCN1Q9ULQ1 816 aa16.1■□□□□ 0.17
USP46-209ENST00000514536 RBM25P49756 843 aaKnown RBP16.09■□□□□ 0.17
USP46-209ENST00000514536 GHRHRQ02643 423 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 NTRK3Q16288 839 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 PHKBQ93100 1093 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 KIF2CQ99661 725 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 KATNBL1Q9H079 304 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 FAM184BQ9ULE4 1060 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 LOC102724159A0A0B4J2E5 919 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 AKR1A1P14550 325 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 CAPN2P17655 700 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 PDE4DQ08499 809 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 PWP2Q15269 919 aaKnown RBP16.09■□□□□ 0.17
USP46-209ENST00000514536 CCDC144BQ3MJ40 725 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
USP46-209ENST00000514536 NSUN6Q8TEA1 469 aaKnown RBP16.09■□□□□ 0.17
USP46-209ENST00000514536 MPHOSPH6Q99547 160 aaKnown RBP16.09■□□□□ 0.17
USP46-209ENST00000514536 SLKQ9H2G2 1235 aaPredicted RBP16.09■□□□□ 0.17
USP46-209ENST00000514536 PLXNA1Q9UIW2 1896 aa16.08■□□□□ 0.17
USP46-209ENST00000514536 B4DLN1 442 aa16.08■□□□□ 0.16
USP46-209ENST00000514536 PRPF3O43395 683 aaKnown RBP16.08■□□□□ 0.16
USP46-209ENST00000514536 IFNAR1P17181 557 aa16.08■□□□□ 0.16
USP46-209ENST00000514536 EIF2AK2P19525 551 aaKnown RBP16.08■□□□□ 0.16
USP46-209ENST00000514536 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
USP46-209ENST00000514536 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
USP46-209ENST00000514536 FBXO16Q8IX29 292 aaPredicted RBP16.08■□□□□ 0.16
USP46-209ENST00000514536 SLC26A6Q9BXS9 759 aa16.08■□□□□ 0.16
USP46-209ENST00000514536 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
USP46-209ENST00000514536 PDGFCQ9NRA1 345 aa16.08■□□□□ 0.16
USP46-209ENST00000514536 CPLX1O14810 134 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 FARP2O94887 1054 aaPredicted RBP16.07■□□□□ 0.16
USP46-209ENST00000514536 RARBP10826 455 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 EDNRBP24530 442 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms