RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 KANSL2Q9H9L4 492 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 L2HGDHQ9H9P8 463 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 EXOC1Q9NV70 894 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 LRWD1Q9UFC0 647 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 ZNF646O15015 1829 aaPredicted RBP9.21□□□□□ -0.94
CPNE4-211ENST00000514439 TNS1Q9HBL0 1735 aaKnown RBP9.21□□□□□ -0.94
CPNE4-211ENST00000514439 PHLPP2Q6ZVD8 1323 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 SOWAHDA6NJG2 315 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 PSMA7O14818 248 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 RAD21O60216 631 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 RXRBP28702 533 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 CASP14P31944 242 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 SLC1A4P43007 532 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 ASIC1P78348 528 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 MTF1Q14872 753 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 TMEM266Q2M3C6 531 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 TATDN1Q6P1N9 297 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 CREBRFQ8IUR6 639 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 MKL1Q969V6 931 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 TRIM47Q96LD4 638 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 TRIM34Q9BYJ4 488 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 NYAP2Q9P242 653 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 DNAI1Q9UI46 699 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 MYH4Q9Y623 1939 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 POTEMA6NI47 508 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 FANCGO15287 622 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 SLU7O95391 586 aaKnown RBP9.2□□□□□ -0.94
CPNE4-211ENST00000514439 FXR1P51114 621 aaKnown RBP eCLIP9.2□□□□□ -0.94
CPNE4-211ENST00000514439 MRPL12P52815 198 aaKnown RBP9.2□□□□□ -0.94
CPNE4-211ENST00000514439 ICA1Q05084 483 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 PDE4DQ08499 809 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 SEPT2Q15019 361 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 SLC15A2Q16348 729 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 QRICH1Q2TAL8 776 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 PPP4R3AQ6IN85 833 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 TTI2Q6NXR4 508 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 CNGA4Q8IV77 575 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 PDCL2Q8N4E4 241 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 DCAF4Q8WV16 495 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 CCDC47Q96A33 483 aaKnown RBP9.2□□□□□ -0.94
CPNE4-211ENST00000514439 ERO1AQ96HE7 468 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 ARID3AQ99856 593 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 DESI2Q9BSY9 194 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 NAA15Q9BXJ9 866 aaKnown RBP9.2□□□□□ -0.94
CPNE4-211ENST00000514439 BLOC1S4Q9NUP1 217 aa9.2□□□□□ -0.94
CPNE4-211ENST00000514439 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 GDF11O95390 407 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 AMPD3Q01432 767 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 STK4Q13043 487 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 CCDC93Q567U6 631 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 SLFN13Q68D06 897 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 RAD9BQ6WBX8 426 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 TMEM179Q6ZVK1 233 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 SIAH1Q8IUQ4 282 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 DHTKD1Q96HY7 919 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 PNMA5Q96PV4 448 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 SRRTQ9BXP5 876 aaKnown RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 RAB34Q9BZG1 259 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 THAP9Q9H5L6 903 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 TDRD3Q9H7E2 651 aaKnown RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 PSTPIP2Q9H939 334 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 DDX25Q9UHL0 483 aaKnown RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 RGPD3A6NKT7 1758 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 RGPD4Q7Z3J3 1758 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 YDJCA8MPS7 323 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 FCER1AP12319 257 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 EEF1GP26641 437 aaKnown RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 UBXN1Q04323 297 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 PDIA5Q14554 519 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 MCM6Q14566 821 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 CDC37Q16543 378 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 SV2BQ7L1I2 683 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 SNX29Q8TEQ0 813 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 LARP4BQ92615 738 aaKnown RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 P2RX5Q93086 422 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 CCDC51Q96ER9 411 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 CDK5RAP3Q96JB5 506 aa9.19□□□□□ -0.94
CPNE4-211ENST00000514439 DUSP9Q99956 384 aaKnown RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 ATF5Q9Y2D1 282 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 V9GYY5 206 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-211ENST00000514439 ATRNL1Q5VV63 1379 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 MYMKA6NI61 221 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 LGALS16A8MUM7 142 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 PPIP5K2O43314 1243 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 TPM1P09493 284 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 GCFC2P16383 781 aaKnown RBP9.18□□□□□ -0.94
CPNE4-211ENST00000514439 FECHP22830 423 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 CCNE1P24864 410 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms