RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TEX11Q8IYF3 940 aa8.35□□□□□ -1.07
CLIP1-205ENST00000514271 MAGEB6Q8N7X4 407 aa8.35□□□□□ -1.07
CLIP1-205ENST00000514271 NCAPGQ9BPX3 1015 aa8.35□□□□□ -1.07
CLIP1-205ENST00000514271 TRIM34Q9BYJ4 488 aa8.35□□□□□ -1.07
CLIP1-205ENST00000514271 ABCB6Q9NP58 842 aa8.35□□□□□ -1.07
CLIP1-205ENST00000514271 GPHNQ9NQX3 736 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-205ENST00000514271 KCNQ5Q9NR82 932 aa8.35□□□□□ -1.07
CLIP1-205ENST00000514271 TTC36A6NLP5 189 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 CCDC178Q5BJE1 867 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 CD302Q8IX05 232 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 OLIG1Q8TAK6 271 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 MAGEC3Q8TD91 643 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 STAG1Q8WVM7 1258 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 AIDAQ96BJ3 306 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 LY9Q9HBG7 655 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 NCOA5Q9HCD5 579 aaKnown RBP8.34□□□□□ -1.07
CLIP1-205ENST00000514271 NENFQ9UMX5 172 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 PPFIA4O75335 1185 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 HIRAP54198 1017 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-205ENST00000514271 USP14P54578 494 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 RHBDL3P58872 404 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 C1QTNF8P60827 252 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 GRIN1Q05586 938 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 BYSLQ13895 437 aaKnown RBP8.34□□□□□ -1.07
CLIP1-205ENST00000514271 DPY19L2P1Q6NXN4 242 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 SAMD7Q7Z3H4 446 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 C4orf32Q8N8J7 132 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 GOLGA1Q92805 767 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 CDCA5Q96FF9 252 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 PRMT6Q96LA8 375 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-205ENST00000514271 RIOK1Q9BRS2 568 aaKnown RBP8.34□□□□□ -1.07
CLIP1-205ENST00000514271 TLL2Q9Y6L7 1015 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 ZNF532Q9HCE3 1301 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 RASSF9O75901 435 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 MYBL2P10244 700 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 HSPA6P17066 643 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 HERVK_113P62684 666 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 CASP8Q14790 479 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 CCDC96Q2M329 555 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 CCDC51Q96ER9 411 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 IRX2Q9BZI1 471 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-205ENST00000514271 PI4KBQ9UBF8 816 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 ARID2Q68CP9 1835 aa8.34□□□□□ -1.07
CLIP1-205ENST00000514271 ATP8B3O60423 1300 aa8.34□□□□□ -1.08
CLIP1-205ENST00000514271 WTIPA6NIX2 430 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-205ENST00000514271 TFRCP02786 760 aaKnown RBP8.33□□□□□ -1.08
CLIP1-205ENST00000514271 PLCD1P51178 756 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 GOLGA8FQ08AF8 430 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 GOLGA8DPQ0D2H9 430 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 WHAMMP3Q1A5X7 153 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 PDXDC2PQ6P474 469 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 CYB5R4Q7L1T6 521 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 SLC51AQ86UW1 340 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 EGFL6Q8IUX8 553 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 MREGQ8N565 214 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 NOA1Q8NC60 698 aaKnown RBP8.33□□□□□ -1.08
CLIP1-205ENST00000514271 CCDC17Q96LX7 622 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 BAG1Q99933 345 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-205ENST00000514271 GBA2Q9HCG7 927 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-205ENST00000514271 RSPH14Q9UHP6 348 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 RTN2O75298 545 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 TUBBP07437 444 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 PRLRP16471 622 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 ECHS1P30084 290 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 PNOCQ13519 176 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 ASTE1Q2TB18 679 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-205ENST00000514271 EFCAB13Q8IY85 973 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 CAVIN3Q969G5 261 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 DEFB129Q9H1M3 183 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 CNTNAP1P78357 1384 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 OTOFQ9HC10 1997 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 ZSCAN12O43309 604 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 IVLP07476 585 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 FAM228AQ86W67 206 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 TACO1Q9BSH4 297 aaKnown RBP8.33□□□□□ -1.08
CLIP1-205ENST00000514271 SENP2Q9HC62 589 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 PDE11AQ9HCR9 933 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 GJB4Q9NTQ9 266 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 PCDHA5Q9Y5H7 936 aa8.33□□□□□ -1.08
CLIP1-205ENST00000514271 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 HDXQ7Z353 690 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 ZSCAN29Q8IWY8 852 aaPredicted RBP8.32□□□□□ -1.08
CLIP1-205ENST00000514271 TMEM59LQ9UK28 342 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 SRPRBQ9Y5M8 271 aaKnown RBP8.32□□□□□ -1.08
CLIP1-205ENST00000514271 F8W031 263 aaPredicted RBP8.32□□□□□ -1.08
CLIP1-205ENST00000514271 POTEB2H3BUK9 544 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 LIFRP42702 1097 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 FXR1P51114 621 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLIP1-205ENST00000514271 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 RASA3Q14644 834 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 NBPF9Q3BBW0 867 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 TBC1D10CQ8IV04 446 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 MMGT1Q8N4V1 131 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 MLKLQ8NB16 471 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 LRRC15Q8TF66 581 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 AS3MTQ9HBK9 375 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms