RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 CEP290O15078 2479 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 NAV1Q8NEY1 1877 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 A0A1W2PRU2 124 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 PRKAB2O43741 272 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
TRIO-220ENST00000512979 CNMDO75829 334 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 GGCXP38435 758 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 CATSPERGQ6ZRH7 1159 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 PLEKHH3Q7Z736 793 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 SAP130Q9H0E3 1048 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
TRIO-220ENST00000512979 RABGAP1Q9Y3P9 1069 aa11.34□□□□□ -0.59
TRIO-220ENST00000512979 DDX60LQ5H9U9 1706 aaKnown RBP11.34□□□□□ -0.59
TRIO-220ENST00000512979 LILRA1O75019 489 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 CHGBP05060 677 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 XRCC5P13010 732 aaKnown RBP11.33□□□□□ -0.6
TRIO-220ENST00000512979 TCF3P15923 654 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 ZKSCAN1P17029 563 aaPredicted RBP11.33□□□□□ -0.6
TRIO-220ENST00000512979 RGS2P41220 211 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 RPIAP49247 311 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 CCNA1P78396 465 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 TBCELQ5QJ74 424 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 WDR78Q5VTH9 848 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 DIS3LQ8TF46 1054 aaKnown RBP11.33□□□□□ -0.6
TRIO-220ENST00000512979 DYNLL2Q96FJ2 89 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
TRIO-220ENST00000512979 SWAP70Q9UH65 585 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
TRIO-220ENST00000512979 A0A1W2PRG0 241 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 FXR1P51114 621 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRIO-220ENST00000512979 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 UBE3CQ15386 1083 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
TRIO-220ENST00000512979 MAP3K21Q5TCX8 1036 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 ZSCAN25Q6NSZ9 544 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 C16orf46Q6P387 395 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 CYP2U1Q7Z449 544 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 USP6NLQ92738 828 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 APBA2Q99767 749 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 ATP8A2Q9NTI2 1148 aa11.32□□□□□ -0.6
TRIO-220ENST00000512979 PLXNB2O15031 1838 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 CYP2D7A0A087X1C5 515 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 GLRX3O76003 335 aaKnown RBP11.31□□□□□ -0.6
TRIO-220ENST00000512979 AKR1B1P15121 316 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 VAMP1P23763 118 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 CCL14Q16627 93 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 LBX2Q6XYB7 198 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 TMC7Q7Z402 723 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 SLC9A9Q8IVB4 645 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 CCDC116Q8IYX3 515 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 RBCK1Q9BYM8 510 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 TANGO6Q9C0B7 1094 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 ECHDC1Q9NTX5 307 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
TRIO-220ENST00000512979 BTBD7Q9P203 1132 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
TRIO-220ENST00000512979 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 CD2BP2O95400 341 aaKnown RBP11.3□□□□□ -0.6
TRIO-220ENST00000512979 CDK8P49336 464 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 FOXK2Q01167 660 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 ICA1Q05084 483 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 CACNB2Q08289 660 aaPredicted RBP11.3□□□□□ -0.6
TRIO-220ENST00000512979 COG2Q14746 738 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 C12orf60Q5U649 245 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 CLEC10AQ8IUN9 316 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 PUS7LQ9H0K6 701 aaKnown RBP11.3□□□□□ -0.6
TRIO-220ENST00000512979 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRIO-220ENST00000512979 RAB6BQ9NRW1 208 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 OGDHLQ9ULD0 1010 aa11.3□□□□□ -0.6
TRIO-220ENST00000512979 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 A6NJY4 79 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 NDUFB5O43674 189 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 ADH1CP00326 375 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
TRIO-220ENST00000512979 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
TRIO-220ENST00000512979 GRB14Q14449 540 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 LPAR1Q92633 364 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 CCDC17Q96LX7 622 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 C2orf49Q9BVC5 232 aaPredicted RBP11.29□□□□□ -0.6
TRIO-220ENST00000512979 C11orf49Q9H6J7 331 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 SH2D4AQ9H788 454 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 HOXC10Q9NYD6 342 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 TMX2Q9Y320 296 aa11.29□□□□□ -0.6
TRIO-220ENST00000512979 SIAH2O43255 324 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 FLOT1O75955 427 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
TRIO-220ENST00000512979 SMTNP53814 917 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms