RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 DLX3O60479 287 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 ESR1P03372 595 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 HMGB1P09429 215 aaKnown RBP5.9□□□□□ -1.46
HTT-210ENST00000512909 CD8BP10966 210 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 CNGA1P29973 690 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 LTBRP36941 435 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 GTF2A2P52657 109 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 HK2P52789 917 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 TEKQ02763 1124 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 C21orf62-AS1Q17RA5 79 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 MSMPQ1L6U9 139 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 PRSS53Q2L4Q9 553 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 FNDC3BQ53EP0 1204 aaKnown RBP5.9□□□□□ -1.46
HTT-210ENST00000512909 ZMYM1Q5SVZ6 1142 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 IFNL3Q8IZI9 196 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 ANKS4BQ8N8V4 417 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 JMYQ8N9B5 988 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 EXOC2Q96KP1 924 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 KANSL2Q9H9L4 492 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 SPC25Q9HBM1 224 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 CD2APQ9Y5K6 639 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 TAF6LQ9Y6J9 622 aa5.9□□□□□ -1.46
HTT-210ENST00000512909 FGF10O15520 208 aaPredicted RBP5.89□□□□□ -1.47
HTT-210ENST00000512909 OPA1O60313 960 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 DNAJC6O75061 913 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 RAPGEF3O95398 923 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 SCG5P05408 212 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 CD96P40200 585 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 GYS2P54840 703 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 RPL11P62913 178 aaKnown RBP5.89□□□□□ -1.47
HTT-210ENST00000512909 GUCY1A3Q02108 690 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 SF1Q15637 639 aaKnown RBP5.89□□□□□ -1.47
HTT-210ENST00000512909 ACBD5Q5T8D3 534 aaPredicted RBP5.89□□□□□ -1.47
HTT-210ENST00000512909 EGFLAMQ63HQ2 1017 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 CNNM4Q6P4Q7 775 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 CEP128Q6ZU80 1094 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
HTT-210ENST00000512909 FILIP1Q7Z7B0 1213 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 CABP7Q86V35 215 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 CPNE8Q86YQ8 564 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 NIM1KQ8IY84 436 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 OSBP2Q969R2 916 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 PHF20Q9BVI0 1012 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 NCOA5Q9HCD5 579 aaKnown RBP5.89□□□□□ -1.47
HTT-210ENST00000512909 CCDC39Q9UFE4 941 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 TMEM59LQ9UK28 342 aa5.89□□□□□ -1.47
HTT-210ENST00000512909 COA3Q9Y2R0 106 aaPredicted RBP5.89□□□□□ -1.47
HTT-210ENST00000512909 BLACEA4D250 179 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 WTIPA6NIX2 430 aaPredicted RBP5.88□□□□□ -1.47
HTT-210ENST00000512909 B4E1Z4 1266 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 GSTA4O15217 222 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 PABPC4Q13310 644 aaKnown RBP eCLIP5.88□□□□□ -1.47
HTT-210ENST00000512909 RTP2Q5QGT7 225 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 FOXB2Q5VYV0 432 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 GALNT18Q6P9A2 607 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 SLC23A3Q6PIS1 610 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 RSPO2Q6UXX9 243 aaPredicted RBP5.88□□□□□ -1.47
HTT-210ENST00000512909 ZNF574Q6ZN55 896 aaPredicted RBP5.88□□□□□ -1.47
HTT-210ENST00000512909 DTX1Q86Y01 620 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 ZC3H7AQ8IWR0 971 aaKnown RBP5.88□□□□□ -1.47
HTT-210ENST00000512909 DHX37Q8IY37 1157 aaKnown RBP5.88□□□□□ -1.47
HTT-210ENST00000512909 COPS5Q92905 334 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 NINJ1Q92982 152 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 MFSD3Q96ES6 412 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 MAP6Q96JE9 813 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 ZFYVE21Q9BQ24 234 aa5.88□□□□□ -1.47
HTT-210ENST00000512909 A0A1W2PQ45 241 aaPredicted RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 A0A1W2PQY0 241 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 FITM1A5D6W6 292 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 IRS4O14654 1257 aaPredicted RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 PRNPP04156 253 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 CPEP16870 476 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 ARL4AP40617 200 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 KIR2DL1P43626 348 aaPredicted RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 KIR2DL2P43627 348 aaPredicted RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 NEK4P51957 841 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 RTP1P59025 263 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 GPR85P60893 370 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 ST5P78524 1137 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 SART3Q15020 963 aaKnown RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 FAM47CQ5HY64 1035 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 ZPBP2Q6X784 338 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 AHI1Q8N157 1196 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 PANK1Q8TE04 598 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 FRS2Q8WU20 508 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 KISS1RQ969F8 398 aaPredicted RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 MMP19Q99542 508 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 MCMBPQ9BTE3 642 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 ADAMTS10Q9H324 1103 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 GPR27Q9NS67 375 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 MAGEC2Q9UBF1 373 aaPredicted RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 PCDHA2Q9Y5H9 948 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 TIMM13Q9Y5L4 95 aaPredicted RBP5.87□□□□□ -1.47
HTT-210ENST00000512909 SBNO2Q9Y2G9 1366 aa5.87□□□□□ -1.47
HTT-210ENST00000512909 DNMBPQ6XZF7 1577 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 TTBK1Q5TCY1 1321 aaPredicted RBP5.86□□□□□ -1.47
HTT-210ENST00000512909 RFPL3O75679 317 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 MYCLP1P12525 358 aaPredicted RBP5.86□□□□□ -1.47
HTT-210ENST00000512909 SOX5P35711 763 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 CD97P48960 835 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms