RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 PLAGL2Q9UPG8 496 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 SIK3Q9Y2K2 1263 aa12.89□□□□□ -0.35
SNX25-205ENST00000512853 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
SNX25-205ENST00000512853 ITPK1Q13572 414 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 SPA17Q15506 151 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
SNX25-205ENST00000512853 SH3GL2Q99962 352 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 DUSP10Q9Y6W6 482 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 GOLGA6BA6NDN3 693 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 ZMYND10O75800 440 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
SNX25-205ENST00000512853 ATP6V1AP38606 617 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 ASIC1P78348 528 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 STK4Q13043 487 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 ORC2Q13416 577 aaPredicted RBP12.88□□□□□ -0.35
SNX25-205ENST00000512853 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 CCDC42Q96M95 316 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 PLIN2Q99541 437 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 HYOU1Q9Y4L1 999 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 PCDHA13Q9Y5I0 950 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 CAPN6Q9Y6Q1 641 aa12.88□□□□□ -0.35
SNX25-205ENST00000512853 SBF2Q86WG5 1849 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 LOC102724428A0A0B4J2F2 783 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 GOLGA6CA6NDK9 693 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 PJA2O43164 708 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 CYTH3O43739 400 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 GOLGA6DP0CG33 693 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 KLRK1P26718 216 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
SNX25-205ENST00000512853 SIK1P57059 783 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 TFAP4Q01664 338 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 PPFIA1Q13136 1202 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 TXNRD1Q16881 649 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 C12orf60Q5U649 245 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 GBP6Q6ZN66 633 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 PCMTD1Q96MG8 357 aaPredicted RBP12.87□□□□□ -0.35
SNX25-205ENST00000512853 LZTS2Q9BRK4 669 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 IFIH1Q9BYX4 1025 aaKnown RBP12.87□□□□□ -0.35
SNX25-205ENST00000512853 FAM107BQ9H098 131 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 GOLGA6AQ9NYA3 693 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
SNX25-205ENST00000512853 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
SNX25-205ENST00000512853 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 CLSTN1O94985 981 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 FCER1AP12319 257 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 PRDX5P30044 214 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 KIF11P52732 1056 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 AMPD3Q01432 767 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 DNAJC21Q5F1R6 531 aaKnown RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 SND1Q7KZF4 910 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNX25-205ENST00000512853 KRT26Q7Z3Y9 468 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 HEATR3Q7Z4Q2 680 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 SPATA4Q8NEY3 305 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 CAVIN3Q969G5 261 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 ZFP91Q96JP5 570 aaPredicted RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 OSBPL9Q96SU4 736 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 MLXIPQ9HAP2 919 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 PLEKP08567 350 aaPredicted RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 EPHB4P54760 987 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 NNTQ13423 1086 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNX25-205ENST00000512853 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 MAN2A1Q16706 1144 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 FOXR2Q6PJQ5 311 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 GDAP1L1Q96MZ0 367 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 ALS2CR12Q96Q35 445 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 MMTAG2Q9BU76 263 aaKnown RBP12.86□□□□□ -0.35
SNX25-205ENST00000512853 SPZ1Q9BXG8 430 aa12.86□□□□□ -0.35
SNX25-205ENST00000512853 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
SNX25-205ENST00000512853 STRCQ7RTU9 1775 aa12.85□□□□□ -0.35
SNX25-205ENST00000512853 CDK5RAP2Q96SN8 1893 aa12.85□□□□□ -0.35
SNX25-205ENST00000512853 RGL2O15211 777 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms