RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RTEL1Q9NZ71 1219 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TTLL3Q9Y4R7 772 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 A0A1W2PQH9 124 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 IQCA1LA6NCM1 817 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 B4E171 279 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 PLD2O14939 933 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 FRS3O43559 492 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 PAK3O75914 559 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 HSPA4LO95757 839 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 VEGFAP15692 232 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 CCND1P24385 295 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TNNT3P45378 269 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 YARSP54577 528 aaKnown RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 KIAA2012Q0VF49 1180 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 AP1B1Q10567 949 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 GTF2H3Q13889 308 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TRIM68Q6AZZ1 485 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 GGT6Q6P531 493 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 CEP68Q76N32 757 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 NLRP8Q86W28 1048 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TRMT44Q8IYL2 757 aaKnown RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 GLIS3Q8NEA6 775 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 GIMAP1Q8WWP7 306 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TTLL2Q9BWV7 592 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 LMAN2LQ9H0V9 348 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 SIL1Q9H173 461 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 GPSM3Q9Y4H4 160 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 DDX3YO15523 660 aaKnown RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 NCK2O43639 380 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 B3GALNT1O75752 331 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 JMJD7P0C870 316 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 ATP6V1AP38606 617 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 MLLT1Q03111 559 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 DMTNQ08495 405 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 CCDC15Q0P6D6 951 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 TTLL5Q6EMB2 1281 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZBTB33Q86T24 672 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 NLRP14Q86W24 1093 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 FCHSD1Q86WN1 690 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 PLD6Q8N2A8 252 aaKnown RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC7A14Q8TBB6 771 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 UCMAQ8WVF2 138 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 VPS11Q9H270 941 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 AGO4Q9HCK5 861 aaKnown RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 TRIM39Q9HCM9 518 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 A0A0B4J203 849 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 ERC2O15083 957 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 PQBP1O60828 265 aaKnown RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 MT-ND3P03897 115 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 XBP1P17861 261 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 ACTN2P35609 894 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPM1AP35813 382 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 POLR2FP61218 127 aaKnown RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC9A5Q14940 896 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 ANO4Q32M45 955 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 FIP1L1Q6UN15 594 aaKnown RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 PDZD4Q76G19 769 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 TTC6Q86TZ1 520 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 PAIP2Q9BPZ3 127 aaKnown RBP7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 BHMT2Q9H2M3 363 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 ARHGEF4Q9NR80 690 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 DACT1Q9NYF0 836 aa7.18□□□□□ -1.26
TRAPPC11-209ENST00000512476 ITIH6Q6UXX5 1313 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZNF891A8MT65 544 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 DOK2O60496 412 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 CTNND1O60716 968 aaKnown RBP7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 BBOX1O75936 387 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 CFHP08603 1231 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 PYGMP11217 842 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 HADHAP40939 763 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 STAT1P42224 750 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 MCM2P49736 904 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 SATB1Q01826 763 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 PWP1Q13610 501 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 FAM117BQ6P1L5 589 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC9A9Q8IVB4 645 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 TRIM42Q8IWZ5 723 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 CMTR2Q8IYT2 770 aaKnown RBP7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPP1R14CQ8TAE6 165 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 HSPBAP1Q96EW2 488 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 BRMS1Q9HCU9 246 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 MARK1Q9P0L2 795 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 GRHPRQ9UBQ7 328 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZNRF3Q9ULT6 936 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 SOS1Q07889 1333 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 SPTLC2O15270 562 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 TADA3O75528 432 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 PAPLNO95428 1278 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZBTB48P10074 688 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 LIFRP42702 1097 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 DCAF7P61962 342 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 SMAD4Q13485 552 aaKnown RBP7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPA1Q15181 289 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 DHCR24Q15392 516 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 PKDCCQ504Y2 493 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 ERC1Q8IUD2 1116 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms