RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 PPARAQ07869 468 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 IMMTQ16891 758 aaKnown RBP11.16□□□□□ -0.62
SNF8-211ENST00000512243 CRTC2Q53ET0 693 aaPredicted RBP11.16□□□□□ -0.62
SNF8-211ENST00000512243 C12orf60Q5U649 245 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 DLK2Q6UY11 383 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNF8-211ENST00000512243 SERPINB13Q9UIV8 391 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 HCN4Q9Y3Q4 1203 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 RBM8AQ9Y5S9 174 aaKnown RBP11.16□□□□□ -0.62
SNF8-211ENST00000512243 DNMT3AQ9Y6K1 912 aaPredicted RBP11.16□□□□□ -0.62
SNF8-211ENST00000512243 MYH4Q9Y623 1939 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 M0R2N6 131 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 FAM157BP0CG42 384 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 IREB2P48200 963 aaKnown RBP11.15□□□□□ -0.62
SNF8-211ENST00000512243 HAND2P61296 217 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNF8-211ENST00000512243 PRKG1Q13976 671 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 C16orf86Q6ZW13 317 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.62
SNF8-211ENST00000512243 MAP4K1Q92918 833 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 ZNF287Q9HBT7 754 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 GBA2Q9HCG7 927 aaPredicted RBP11.15□□□□□ -0.62
SNF8-211ENST00000512243 SWAP70Q9UH65 585 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 ANAPC4Q9UJX5 808 aa11.15□□□□□ -0.62
SNF8-211ENST00000512243 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
SNF8-211ENST00000512243 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 ZNF213O14771 459 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 EPB41L2O43491 1005 aaKnown RBP11.14□□□□□ -0.63
SNF8-211ENST00000512243 MCCP23508 829 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 SEC13P55735 322 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 SNRPNP63162 240 aaKnown RBP11.14□□□□□ -0.63
SNF8-211ENST00000512243 FKBP1BP68106 108 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 GABPAQ06546 454 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 PDE4BQ07343 736 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 KANK3Q6NY19 840 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 SLCO4C1Q6ZQN7 724 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 METTL16Q86W50 562 aaKnown RBP11.14□□□□□ -0.63
SNF8-211ENST00000512243 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 C2orf69Q8N8R5 385 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 WRNIP1Q96S55 665 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 DNAJC18Q9H819 358 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 ANGEL1Q9UNK9 670 aaKnown RBP11.14□□□□□ -0.63
SNF8-211ENST00000512243 PHIPQ8WWQ0 1821 aa11.14□□□□□ -0.63
SNF8-211ENST00000512243 PCP11498 1178 aaKnown RBP11.13□□□□□ -0.63
SNF8-211ENST00000512243 CDK8P49336 464 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 TBC1D10CQ8IV04 446 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 BEND7Q8N7W2 519 aaPredicted RBP11.13□□□□□ -0.63
SNF8-211ENST00000512243 SLC44A5Q8NCS7 719 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 RNF41Q9H4P4 317 aaPredicted RBP11.13□□□□□ -0.63
SNF8-211ENST00000512243 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 NEUROD4Q9HD90 331 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 PTPRFP10586 1907 aa11.13□□□□□ -0.63
SNF8-211ENST00000512243 TMEM88BA6NKF7 163 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 PHF20L1A8MW92 1017 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 SMIM22K7EJ46 135 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 SLC27A2O14975 620 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
SNF8-211ENST00000512243 ARAFP10398 606 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 AMPD1P23109 780 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 SHMT1P34896 483 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 DPYDQ12882 1025 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 PTK7Q13308 1070 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 CERKLQ49MI3 558 aaPredicted RBP11.12□□□□□ -0.63
SNF8-211ENST00000512243 AKNAD1Q5T1N1 836 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 CREB3L3Q68CJ9 461 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 MFSD6Q6ZSS7 791 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■■■■■ 38.3
SNF8-211ENST00000512243 SCG3Q8WXD2 468 aaKnown RBP11.12□□□□□ -0.63
SNF8-211ENST00000512243 HSH2DQ96JZ2 352 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
SNF8-211ENST00000512243 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 CSADQ9Y600 493 aa11.12□□□□□ -0.63
SNF8-211ENST00000512243 USP17L15C9J2P7 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L10C9JJH3 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L13C9JLJ4 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L11C9JVI0 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L18D6R9N7 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L22D6RA61 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L17D6RBQ6 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L19D6RCP7 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L20D6RJB6 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 MPHOSPH10O00566 681 aaKnown RBP11.11□□□□□ -0.63
SNF8-211ENST00000512243 EFSO43281 561 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 ORC4O43929 436 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 CTNND1O60716 968 aaKnown RBP11.11□□□□□ -0.63
SNF8-211ENST00000512243 CYP21A2P08686 494 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
SNF8-211ENST00000512243 INPP5BP32019 993 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP17L24Q0WX57 530 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 TRDNQ13061 729 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms