RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ADARB2Q9NS39 739 aaKnown RBP9.25□□□□□ -0.93
HTT-209ENST00000512068 GGA3Q9NZ52 723 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 GOLGA6L3A6NEY3 463 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 F5H6K3 240 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 UBE2Q2LH0YL09 131 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 DDNO94850 711 aaPredicted RBP9.24□□□□□ -0.93
HTT-209ENST00000512068 SNHG28P0DPA3 235 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 BMP3P12645 472 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 YBX3P16989 372 aaKnown RBP eCLIP9.24□□□□□ -0.93
HTT-209ENST00000512068 ATP2B1P20020 1258 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 CAP2P40123 477 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 NASPP49321 788 aaPredicted RBP9.24□□□□□ -0.93
HTT-209ENST00000512068 KLRC3Q07444 240 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 SUPT20HL1Q3ZLR7 823 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 L1TD1Q5T7N2 865 aaKnown RBP9.24□□□□□ -0.93
HTT-209ENST00000512068 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 KCTD1Q719H9 257 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 BLIDQ8IZY5 108 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 GMCL1Q96IK5 515 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 PIGSQ96S52 555 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 SLC6A16Q9GZN6 736 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 ZMYND15Q9H091 742 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 GLT8D2Q9H1C3 349 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 RIOX1Q9H6W3 641 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 AS3MTQ9HBK9 375 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 HMX1Q9NP08 348 aaPredicted RBP9.24□□□□□ -0.93
HTT-209ENST00000512068 PRDM9Q9NQV7 894 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 PICK1Q9NRD5 415 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 DDX19AQ9NUU7 478 aaKnown RBP9.24□□□□□ -0.93
HTT-209ENST00000512068 BARHL2Q9NY43 387 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 RCOR1Q9UKL0 485 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 PCDHA4Q9UN74 947 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 PITPNM2Q9BZ72 1349 aa9.24□□□□□ -0.93
HTT-209ENST00000512068 ZC3H4Q9UPT8 1303 aaKnown RBP9.24□□□□□ -0.93
HTT-209ENST00000512068 DOCK1Q14185 1865 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 SMCO2A6NFE2 343 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 STXBP3O00186 592 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 ZBTB5O15062 677 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 CTNND1O60716 968 aaKnown RBP9.23□□□□□ -0.93
HTT-209ENST00000512068 NDUFB10O96000 172 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 EGFRP00533 1210 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 SLURP2P0DP57 97 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 NF2P35240 595 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 EPS15P42566 896 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 TRAPPC10P48553 1259 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 ADCY7P51828 1080 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 NR5A1Q13285 461 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 ZSCAN23Q3MJ62 389 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 KRT25Q7Z3Z0 450 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 CCAR1Q8IX12 1150 aaKnown RBP9.23□□□□□ -0.93
HTT-209ENST00000512068 ADGRF4Q8IZF3 695 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 LINC00301Q8NCQ3 95 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 TRPM4Q8TD43 1214 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 MRPS27Q92552 414 aaKnown RBP9.23□□□□□ -0.93
HTT-209ENST00000512068 NUP62CLQ9H1M0 184 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 CTDP1Q9Y5B0 961 aaPredicted RBP9.23□□□□□ -0.93
HTT-209ENST00000512068 CLIC4Q9Y696 253 aa9.23□□□□□ -0.93
HTT-209ENST00000512068 IQCA1LA6NCM1 817 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 CYTH3O43739 400 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 KINO60870 393 aaKnown RBP9.22□□□□□ -0.93
HTT-209ENST00000512068 PPP6R2O75170 966 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 SLC16A2P36021 539 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 STAT2P52630 851 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 USP14P54578 494 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 SLC39A14Q15043 492 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 ZYXQ15942 572 aaKnown RBP9.22□□□□□ -0.93
HTT-209ENST00000512068 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
HTT-209ENST00000512068 TTC38Q5R3I4 469 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 SYDE2Q5VT97 1194 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 ADALQ6DHV7 355 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 PIK3AP1Q6ZUJ8 805 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 RASGRP2Q7LDG7 609 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 FSIP1Q8NA03 581 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 DAGLBQ8NCG7 672 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 CHURC1Q8WUH1 139 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 CCDC34Q96HJ3 373 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 FTOQ9C0B1 505 aaKnown RBP eCLIP9.22□□□□□ -0.93
HTT-209ENST00000512068 CPVLQ9H3G5 476 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 VCPKMTQ9H867 229 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 SCAF8Q9UPN6 1271 aaKnown RBP9.22□□□□□ -0.93
HTT-209ENST00000512068 TMX2Q9Y320 296 aa9.22□□□□□ -0.93
HTT-209ENST00000512068 POLR2AP24928 1970 aaKnown RBP9.22□□□□□ -0.93
HTT-209ENST00000512068 A0A1W2PQ27 194 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 A0A1W2PQ64 194 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 A0A1W2PQD8 194 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 ESYT2A0FGR8 921 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 SYCE3A1L190 88 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 A6NJR5 290 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 CTAGE5O15320 804 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 CUTAO60888 179 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 MARCKSP29966 332 aaPredicted RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 MRPL12P52815 198 aaKnown RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 MAP3K10Q02779 954 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 NONOQ15233 471 aaKnown RBP eCLIP9.21□□□□□ -0.94
HTT-209ENST00000512068 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms