RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 TREML2Q5T2D2 321 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 PI16Q6UXB8 463 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 ZCCHC2Q9C0B9 1178 aaKnown RBP8.21□□□□□ -1.09
COPS4-209ENST00000511653 COPRSQ9NQ92 184 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 PICK1Q9NRD5 415 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 ABCF2Q9UG63 623 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 DYRK1BQ9Y463 629 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 KCNMB2Q9Y691 235 aa8.21□□□□□ -1.09
COPS4-209ENST00000511653 FRMPD3Q5JV73 1810 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 A0A1B0GUL7 405 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 ADCY3O60266 1144 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 MAN1A2O60476 641 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 UBXN2AP68543 259 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 MAP3K10Q02779 954 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 PTSQ03393 145 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 TYRO3Q06418 890 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 EHHADHQ08426 723 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 ORC1Q13415 861 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 GRIN2CQ14957 1233 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.1
COPS4-209ENST00000511653 IER5Q5VY09 327 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 DZIP1Q86YF9 867 aaKnown RBP8.21□□□□□ -1.1
COPS4-209ENST00000511653 CRISPLD1Q9H336 500 aa8.21□□□□□ -1.1
COPS4-209ENST00000511653 NOB1Q9ULX3 412 aaKnown RBP8.21□□□□□ -1.1
COPS4-209ENST00000511653 F11P03951 625 aa8.2□□□□□ -1.1
COPS4-209ENST00000511653 MECOMQ03112 1051 aa8.2□□□□□ -1.1
COPS4-209ENST00000511653 TFCP2Q12800 502 aa8.2□□□□□ -1.1
COPS4-209ENST00000511653 UBAP2LQ14157 1087 aaKnown RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 RRP1BQ14684 758 aaKnown RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 FASTKD5Q7L8L6 764 aaKnown RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 TRMT2AQ8IZ69 625 aaKnown RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 SMCR8Q8TEV9 937 aaPredicted RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 MRRFQ96E11 262 aaKnown RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 GMPR2Q9P2T1 348 aaKnown RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 MYH1P12882 1939 aa8.2□□□□□ -1.1
COPS4-209ENST00000511653 PDS5AQ29RF7 1337 aaKnown RBP8.2□□□□□ -1.1
COPS4-209ENST00000511653 COL2A1P02458 1487 aaPredicted RBP8.19□□□□□ -1.1
COPS4-209ENST00000511653 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 TNPO2O14787 897 aaKnown RBP8.19□□□□□ -1.1
COPS4-209ENST00000511653 CTNND1O60716 968 aaKnown RBP8.19□□□□□ -1.1
COPS4-209ENST00000511653 SGPL1O95470 568 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 MAPK8P45983 427 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 ZGPATQ8N5A5 531 aaKnown RBP8.19□□□□□ -1.1
COPS4-209ENST00000511653 ANKRD13CQ8N6S4 541 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 DIS3LQ8TF46 1054 aaKnown RBP8.19□□□□□ -1.1
COPS4-209ENST00000511653 DEFB118Q96PH6 123 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 CITED4Q96RK1 184 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 HTATIP2Q9BUP3 242 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 PAK6Q9NQU5 681 aaPredicted RBP8.19□□□□□ -1.1
COPS4-209ENST00000511653 HMG20BQ9P0W2 317 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 AGTPBP1Q9UPW5 1226 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 TNNQ9UQP3 1299 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 SLC45A1Q9Y2W3 748 aa8.19□□□□□ -1.1
COPS4-209ENST00000511653 GPR75-ASB3A0A0A6YYF3 556 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 SHROOM1Q2M3G4 852 aaPredicted RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 NSUN4Q96CB9 384 aaKnown RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 GPC6Q9Y625 555 aaPredicted RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 SRGAP3O43295 1099 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 PEX10O60683 326 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 SNRPBP14678 240 aaKnown RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 ARSDP51689 593 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 HMGCS2P54868 508 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 PLCB3Q01970 1234 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 SPP2Q13103 211 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 FAM110CQ1W6H9 321 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 ALKBH8Q96BT7 664 aaKnown RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 DMRTB1Q96MA1 342 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 FAM161BQ96MY7 647 aa8.18□□□□□ -1.1
COPS4-209ENST00000511653 API5Q9BZZ5 524 aaKnown RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 FOXD3Q9UJU5 478 aaPredicted RBP8.18□□□□□ -1.1
COPS4-209ENST00000511653 MUC3AQ02505 3323 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 MCAMP43121 646 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 RARSP54136 660 aaKnown RBP8.17□□□□□ -1.1
COPS4-209ENST00000511653 JAG1P78504 1218 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 MTX1Q13505 466 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 MVPQ14764 893 aaKnown RBP8.17□□□□□ -1.1
COPS4-209ENST00000511653 DBN1Q16643 649 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
COPS4-209ENST00000511653 PAWRQ96IZ0 340 aaKnown RBP8.17□□□□□ -1.1
COPS4-209ENST00000511653 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 NEUROD6Q96NK8 337 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.17□□□□□ -1.1
COPS4-209ENST00000511653 OSBPL5Q9H0X9 879 aaPredicted RBP8.17□□□□□ -1.1
COPS4-209ENST00000511653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.17□□□□□ -1.1
COPS4-209ENST00000511653 NR2E3Q9Y5X4 410 aa8.17□□□□□ -1.1
COPS4-209ENST00000511653 PNMA6EA0A0J9YXQ4 647 aa8.16□□□□□ -1.1
COPS4-209ENST00000511653 TFRCP02786 760 aaKnown RBP8.16□□□□□ -1.1
COPS4-209ENST00000511653 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
COPS4-209ENST00000511653 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
COPS4-209ENST00000511653 TEX11Q8IYF3 940 aa8.16□□□□□ -1.1
COPS4-209ENST00000511653 SPATA5Q8NB90 893 aa8.16□□□□□ -1.1
COPS4-209ENST00000511653 SH3RF3Q8TEJ3 882 aaPredicted RBP8.16□□□□□ -1.1
COPS4-209ENST00000511653 COA7Q96BR5 231 aa8.16□□□□□ -1.1
COPS4-209ENST00000511653 ASCC2Q9H1I8 757 aaPredicted RBP8.16□□□□□ -1.1
COPS4-209ENST00000511653 DNAJC18Q9H819 358 aa8.16□□□□□ -1.1
COPS4-209ENST00000511653 NEUROD4Q9HD90 331 aa8.16□□□□□ -1.1
COPS4-209ENST00000511653 RAI14Q9P0K7 980 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms