RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 LOC102724159A0A0B4J2E5 919 aa14.84□□□□□ -0.03
COL6A6-203ENST00000511332 RPS6P62753 249 aaKnown RBP14.84□□□□□ -0.03
COL6A6-203ENST00000511332 GHRHRQ02643 423 aa14.84□□□□□ -0.03
COL6A6-203ENST00000511332 BAATQ14032 418 aaPredicted RBP14.84□□□□□ -0.03
COL6A6-203ENST00000511332 PWP2Q15269 919 aaKnown RBP14.84□□□□□ -0.03
COL6A6-203ENST00000511332 HEATR3Q7Z4Q2 680 aa14.84□□□□□ -0.03
COL6A6-203ENST00000511332 FAM133AQ8N9E0 248 aa14.84□□□□□ -0.03
COL6A6-203ENST00000511332 MPHOSPH6Q99547 160 aaKnown RBP14.84□□□□□ -0.03
COL6A6-203ENST00000511332 FLRT1Q9NZU1 646 aa14.84□□□□□ -0.03
COL6A6-203ENST00000511332 LIMCH1Q9UPQ0 1083 aa14.84□□□□□ -0.03
COL6A6-203ENST00000511332 SYNGAP1Q96PV0 1343 aa14.84□□□□□ -0.03
COL6A6-203ENST00000511332 CENPFP49454 3210 aa14.83□□□□□ -0.03
COL6A6-203ENST00000511332 PRPF3O43395 683 aaKnown RBP14.83□□□□□ -0.04
COL6A6-203ENST00000511332 CFBP00751 764 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
COL6A6-203ENST00000511332 CALML3P27482 149 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 HSD17B4P51659 736 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 SCRN1Q12765 414 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 NTRK3Q16288 839 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 TEX2Q8IWB9 1127 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 DNERQ8NFT8 737 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 GTF3C6Q969F1 213 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 TINF2Q9BSI4 451 aa14.83□□□□□ -0.04
COL6A6-203ENST00000511332 V9GY48 417 aaPredicted RBP14.83□□□□□ -0.04
COL6A6-203ENST00000511332 hCG_1642624A0A1W2PR95 340 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 ASB14A6NK59 587 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 B4DLN1 442 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 OPLAHO14841 1288 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 IGHA2P01877 340 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 SCG2P13521 617 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 MRPL12P52815 198 aaKnown RBP14.82□□□□□ -0.04
COL6A6-203ENST00000511332 NAPAP54920 295 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 CNTN2Q02246 1040 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 SSRP1Q08945 709 aaKnown RBP14.82□□□□□ -0.04
COL6A6-203ENST00000511332 ME3Q16798 604 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 PFKFB3Q16875 520 aaPredicted RBP14.82□□□□□ -0.04
COL6A6-203ENST00000511332 MAP3K21Q5TCX8 1036 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 WWC2Q6AWC2 1192 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 MAMDC4Q6UXC1 1216 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 CCDC12Q8WUD4 166 aaPredicted RBP14.82□□□□□ -0.04
COL6A6-203ENST00000511332 GPKOWQ92917 476 aaPredicted RBP eCLIP14.82□□□□□ -0.04
COL6A6-203ENST00000511332 CUL5Q93034 780 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 PHKBQ93100 1093 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 ZSCAN31Q96LW9 406 aaPredicted RBP14.82□□□□□ -0.04
COL6A6-203ENST00000511332 FGD4Q96M96 766 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 SH2B1Q9NRF2 756 aaPredicted RBP14.82□□□□□ -0.04
COL6A6-203ENST00000511332 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 CNPY2Q9Y2B0 182 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 STK36Q9NRP7 1315 aa14.82□□□□□ -0.04
COL6A6-203ENST00000511332 GCOM1H8Y6P7 765 aaPredicted RBP14.81□□□□□ -0.04
COL6A6-203ENST00000511332 LARGE1O95461 756 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 POLR2MP0CAP2 368 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 CCL5P13501 91 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 CYP2C19P33261 490 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 MCM2P49736 904 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 ALDH5A1P51649 535 aaPredicted RBP14.81□□□□□ -0.04
COL6A6-203ENST00000511332 CACNB2Q08289 660 aaPredicted RBP14.81□□□□□ -0.04
COL6A6-203ENST00000511332 TRIM32Q13049 653 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 CCDC148Q8NFR7 591 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 GLT8D2Q9H1C3 349 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 HMX1Q9NP08 348 aaPredicted RBP14.81□□□□□ -0.04
COL6A6-203ENST00000511332 BARHL2Q9NY43 387 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 RPTORQ8N122 1335 aa14.81□□□□□ -0.04
COL6A6-203ENST00000511332 SOWAHBA6NEL2 793 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 STXBP3O00186 592 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 DEXIO95424 95 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 CYBAP13498 195 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 ARMCX2Q7L311 632 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 SYTL5Q8TDW5 730 aaPredicted RBP14.8□□□□□ -0.04
COL6A6-203ENST00000511332 NSUN6Q8TEA1 469 aaKnown RBP14.8□□□□□ -0.04
COL6A6-203ENST00000511332 TMEM106CQ9BVX2 250 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL6A6-203ENST00000511332 RNF208Q9H0X6 261 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 UNC93B1Q9H1C4 597 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 PSTPIP2Q9H939 334 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 ASTN1O14525 1302 aa14.8□□□□□ -0.04
COL6A6-203ENST00000511332 PIK3CDO00329 1044 aa14.79□□□□□ -0.04
COL6A6-203ENST00000511332 ADCY7P51828 1080 aa14.79□□□□□ -0.04
COL6A6-203ENST00000511332 MTFR1Q15390 333 aa14.79□□□□□ -0.04
COL6A6-203ENST00000511332 FAM177A1Q8N128 213 aaPredicted RBP14.79□□□□□ -0.04
COL6A6-203ENST00000511332 NECAB1Q8N987 351 aa14.79□□□□□ -0.04
COL6A6-203ENST00000511332 SMARCC2Q8TAQ2 1214 aa14.79□□□□□ -0.04
COL6A6-203ENST00000511332 MORC4Q8TE76 937 aa14.79□□□□□ -0.04
COL6A6-203ENST00000511332 WASF1Q92558 559 aa14.79□□□□□ -0.04
COL6A6-203ENST00000511332 PAK6Q9NQU5 681 aaPredicted RBP14.79□□□□□ -0.04
COL6A6-203ENST00000511332 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.79□□□□□ -0.04
COL6A6-203ENST00000511332 MYH7BA7E2Y1 1941 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 ESYT2A0FGR8 921 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 CCDC85CA6NKD9 419 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 MSCO60682 206 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 MYCP01106 439 aaPredicted RBP14.78□□□□□ -0.04
COL6A6-203ENST00000511332 HOXA13P31271 388 aaPredicted RBP14.78□□□□□ -0.04
COL6A6-203ENST00000511332 PDE4DQ08499 809 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 PKN1Q16512 942 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 ARHGEF16Q5VV41 709 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 TBC1D5Q92609 795 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 IWS1Q96ST2 819 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 RMDN3Q96TC7 470 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 ABHD16BQ9H3Z7 469 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms