RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 DPH6Q7L8W6 267 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 LRP10Q7Z4F1 713 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 TRIM59Q8IWR1 403 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 DRC1Q96MC2 740 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 IPO9Q96P70 1041 aaKnown RBP6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 G6PC3Q9BUM1 346 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 DCP1AQ9NPI6 582 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 ST7Q9NRC1 585 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 SUSD2Q9UGT4 822 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 GPR55Q9Y2T6 319 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 YBX2Q9Y2T7 364 aaKnown RBP6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 BAZ1BQ9UIG0 1483 aaKnown RBP6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 LOC105371045A0A1W2PR82 267 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 OR14I1A6ND48 311 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 APPP05067 770 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 MPOP05164 745 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 PDE6BP35913 854 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 RBL2Q08999 1139 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 IFRD2Q12894 506 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 HSP90AA2PQ14568 343 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 KCNA10Q16322 511 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 DPY19L1Q2PZI1 675 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 AMIGO3Q86WK7 504 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 CCDC113Q9H0I3 377 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 EPB41L4BQ9H329 900 aa6.25□□□□□ -1.41
HMGB3P13-201ENST00000511263 NPHP3-ACAD11A0A0J9YXS1 232 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 STXBP3O00186 592 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 ETV2O00321 342 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 VAMP4O75379 141 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 TMEM253P0C7T8 217 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 CYP4F8P98187 520 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 HSF5Q4G112 596 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 GTF2IRD2BQ6EKJ0 949 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 SLCO6A1Q86UG4 719 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 GTF2IRD2Q86UP8 949 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 NUP43Q8NFH3 380 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 NLGN2Q8NFZ4 835 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 INTS4Q96HW7 963 aaKnown RBP6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 SLC26A8Q96RN1 970 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 NKX2-4Q9H2Z4 354 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 C19orf44Q9H6X5 657 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 APEX2Q9UBZ4 518 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 HMGXB3Q12766 1538 aa6.24□□□□□ -1.41
HMGB3P13-201ENST00000511263 CADPSQ9ULU8 1353 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 HRKO00198 91 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 PDPK1O15530 556 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 MYO1BO43795 1136 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 NPHS1O60500 1241 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 PSPNO60542 156 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 IFNGR1P15260 489 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 PRKCAP17252 672 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 GTF2A2P52657 109 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 NR1I3Q14994 352 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 E4F1Q66K89 784 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 ZPBP2Q6X784 338 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 NLRX1Q86UT6 975 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 UBXN4Q92575 508 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 MKL1Q969V6 931 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 ACSL6Q9UKU0 697 aa6.23□□□□□ -1.41
HMGB3P13-201ENST00000511263 CCDC88BA6NC98 1476 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 TOP2AP11388 1531 aaKnown RBP6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 B2RBV5 119 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 ITGAVP06756 1048 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 SNRPB2P08579 225 aaKnown RBP6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 HMGB1P09429 215 aaKnown RBP6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 TRHRP34981 398 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 KCNJ6P48051 423 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 SCRN1Q12765 414 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 RASGRF1Q13972 1273 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 NFE2L2Q16236 605 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 SLC10A6Q3KNW5 377 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 TMEM132EQ6IEE7 984 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 ZNF227Q86WZ6 799 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 CELF2-AS1Q8N7Q2 184 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 KCTD13Q8WZ19 329 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 MRGPRX3Q96LB0 322 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 MMP19Q99542 508 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 PDLIM7Q9NR12 457 aa6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 SMG5Q9UPR3 1016 aaKnown RBP6.22□□□□□ -1.41
HMGB3P13-201ENST00000511263 TCAF2A6NFQ2 919 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 PEX10O60683 326 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 HSP90B1P14625 803 aaKnown RBP6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 DEKP35659 375 aaKnown RBP6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 KCNAB2Q13303 367 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 MTERF2Q49AM1 385 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 ZC3H12BQ5HYM0 836 aaKnown RBP6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 ADGRF1Q5T601 910 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 ZNF513Q8N8E2 541 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 COPS5Q92905 334 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 C20orf173Q96LM9 149 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 JMJD8Q96S16 334 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 IMPACTQ9P2X3 320 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 EBF1Q9UH73 591 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 RAPGEFL1Q9UHV5 662 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 NUDT5Q9UKK9 219 aa6.21□□□□□ -1.42
HMGB3P13-201ENST00000511263 MEFVO15553 781 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 SEMA7AO75326 666 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 SCG5P05408 212 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms