RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 UNCXA6NJT0 531 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 ICAM1P05362 532 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 SNW1Q13573 536 aaKnown RBP12.09□□□□□ -0.47
DHFR-205ENST00000511032 PRKG1Q13976 671 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 CALCRLQ16602 461 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 UBE2SQ16763 222 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 SHC4Q6S5L8 630 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 MOXD1Q6UVY6 613 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 ELOA2Q8IYF1 753 aaPredicted RBP12.09□□□□□ -0.47
DHFR-205ENST00000511032 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 MAP3K20Q9NYL2 800 aaKnown RBP12.09□□□□□ -0.47
DHFR-205ENST00000511032 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.09□□□□□ -0.47
DHFR-205ENST00000511032 CCDC39Q9UFE4 941 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 HPSEQ9Y251 543 aa12.09□□□□□ -0.47
DHFR-205ENST00000511032 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
DHFR-205ENST00000511032 USP17L15C9J2P7 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L11C9JVI0 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L18D6R9N7 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L22D6RA61 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L19D6RCP7 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L20D6RJB6 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 OAZ1P54368 228 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 PPATQ06203 517 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 USP17L24Q0WX57 530 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 VGLL4Q14135 290 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 NOM1Q5C9Z4 860 aaKnown RBP12.08□□□□□ -0.47
DHFR-205ENST00000511032 KIAA1755Q5JYT7 1200 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 RBM43Q6ZSC3 357 aaKnown RBP12.08□□□□□ -0.47
DHFR-205ENST00000511032 LDHDQ86WU2 507 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 ERO1BQ86YB8 467 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.47
DHFR-205ENST00000511032 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 TMEM260Q9NX78 707 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 AFG3L2Q9Y4W6 797 aa12.08□□□□□ -0.47
DHFR-205ENST00000511032 CFBP00751 764 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 UBA7P41226 1012 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 HMGCS2P54868 508 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 SNAP25P60880 206 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 PABPC4Q13310 644 aaKnown RBP eCLIP12.08□□□□□ -0.48
DHFR-205ENST00000511032 COG2Q14746 738 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 STX1AQ16623 288 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 SH3D19Q5HYK7 790 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 IQUBQ8NA54 791 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 MAF1Q9H063 256 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 SLC38A10Q9HBR0 1119 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 ANO10Q9NW15 660 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 DDX25Q9UHL0 483 aaKnown RBP12.08□□□□□ -0.48
DHFR-205ENST00000511032 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 SNCAIPQ9Y6H5 919 aa12.08□□□□□ -0.48
DHFR-205ENST00000511032 CXCL11O14625 94 aa12.07□□□□□ -0.48
DHFR-205ENST00000511032 POLR2DO15514 142 aaKnown RBP12.07□□□□□ -0.48
DHFR-205ENST00000511032 ZNF76P36508 570 aa12.07□□□□□ -0.48
DHFR-205ENST00000511032 TYRO3Q06418 890 aa12.07□□□□□ -0.48
DHFR-205ENST00000511032 USP17L6PQ6QN14 398 aa12.07□□□□□ -0.48
DHFR-205ENST00000511032 KRBA2Q6ZNG9 492 aa12.07□□□□□ -0.48
DHFR-205ENST00000511032 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
DHFR-205ENST00000511032 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
DHFR-205ENST00000511032 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
DHFR-205ENST00000511032 PHIPQ8WWQ0 1821 aa12.07□□□□□ -0.48
DHFR-205ENST00000511032 SPDYE5A6NIY4 337 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 MEIS2O14770 477 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 SMC2O95347 1197 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 SREBF1P36956 1147 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 FKBP1BP68106 108 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 ARHGAP4P98171 946 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 UVSSAQ2YD98 709 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 TKFCQ3LXA3 575 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 CPXCR1Q8N123 301 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
DHFR-205ENST00000511032 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 CUEDC2Q9H467 287 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 MAGEF1Q9HAY2 307 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
DHFR-205ENST00000511032 RBBP6Q7Z6E9 1792 aaKnown RBP12.05□□□□□ -0.48
DHFR-205ENST00000511032 VWA5AO00534 786 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 ADAMTS3O15072 1205 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 TBX3O15119 743 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 SLC26A4O43511 780 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 ALAS1P13196 640 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 STAT6P42226 847 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 PPIL2Q13356 520 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 SPECC1Q5M775 1068 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
DHFR-205ENST00000511032 FCHSD1Q86WN1 690 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 MB21D1Q8N884 522 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 C4orf32Q8N8J7 132 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 DHX58Q96C10 678 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 CDK5RAP3Q96JB5 506 aa12.05□□□□□ -0.48
DHFR-205ENST00000511032 CCSER1Q9C0I3 900 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms