RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 ABCB11O95342 1321 aa26.81■■□□□ 1.88
SNF8-209ENST00000510558 IFIT3O14879 490 aaKnown RBP26.8■■□□□ 1.88
SNF8-209ENST00000510558 CLTBP09497 229 aa26.8■■□□□ 1.88
SNF8-209ENST00000510558 BEX3Q00994 111 aa26.8■■□□□ 1.88
SNF8-209ENST00000510558 QRICH1Q2TAL8 776 aa26.8■■□□□ 1.88
SNF8-209ENST00000510558 KIAA1211Q6ZU35 1233 aa26.8■■□□□ 1.88
SNF8-209ENST00000510558 JMJD4Q9H9V9 463 aa26.8■■□□□ 1.88
SNF8-209ENST00000510558 VAT1LQ9HCJ6 419 aa26.8■■□□□ 1.88
SNF8-209ENST00000510558 PTGS1P23219 599 aa26.79■■□□□ 1.88
SNF8-209ENST00000510558 ANKRD33Q7Z3H0 272 aa26.79■■□□□ 1.88
SNF8-209ENST00000510558 RGS22Q8NE09 1264 aa26.79■■□□□ 1.88
SNF8-209ENST00000510558 DNERQ8NFT8 737 aa26.79■■□□□ 1.88
SNF8-209ENST00000510558 BADQ92934 168 aa26.79■■□□□ 1.88
SNF8-209ENST00000510558 AP5M1Q9H0R1 490 aa26.79■■□□□ 1.88
SNF8-209ENST00000510558 SZT2Q5T011 3432 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 LAMA3Q16787 3333 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 ERICH2A1L162 156 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 KLRF2D3W0D1 207 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 DYNC1LI2O43237 492 aaPredicted RBP26.78■■□□□ 1.88
SNF8-209ENST00000510558 TMEM63BQ5T3F8 832 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 SKAP1Q86WV1 359 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 FBXO11Q86XK2 927 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 VTI1AQ96AJ9 217 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 TOX2Q96NM4 488 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 MPHOSPH6Q99547 160 aaKnown RBP26.78■■□□□ 1.88
SNF8-209ENST00000510558 MAD2L2Q9UI95 211 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 Q9Y3F1 56 aa26.78■■□□□ 1.88
SNF8-209ENST00000510558 DCDC2CA8MYV0 355 aa26.77■■□□□ 1.88
SNF8-209ENST00000510558 EDNRBP24530 442 aa26.77■■□□□ 1.88
SNF8-209ENST00000510558 WTAPQ15007 396 aa26.77■■□□□ 1.88
SNF8-209ENST00000510558 SART3Q15020 963 aaKnown RBP26.77■■□□□ 1.88
SNF8-209ENST00000510558 FSCN1Q16658 493 aaKnown RBP26.77■■□□□ 1.88
SNF8-209ENST00000510558 ESYT1Q9BSJ8 1104 aa26.77■■□□□ 1.88
SNF8-209ENST00000510558 MAF1Q9H063 256 aa26.77■■□□□ 1.88
SNF8-209ENST00000510558 SENP2Q9HC62 589 aa26.77■■□□□ 1.88
SNF8-209ENST00000510558 MROH7Q68CQ1 1323 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 A0A0U1RQG5 324 aaPredicted RBP26.76■■□□□ 1.87
SNF8-209ENST00000510558 PALM3A6NDB9 673 aaPredicted RBP26.76■■□□□ 1.87
SNF8-209ENST00000510558 KIAA0355O15063 1070 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 PDE4DQ08499 809 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 FAAP100Q0VG06 881 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 DUSP28Q4G0W2 176 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 CHST3Q7LGC8 479 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 MB21D2Q8IYB1 491 aaPredicted RBP26.76■■□□□ 1.87
SNF8-209ENST00000510558 TBC1D5Q92609 795 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 WDR11Q9BZH6 1224 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 LSG1Q9H089 658 aaKnown RBP26.76■■□□□ 1.87
SNF8-209ENST00000510558 TMEM39AQ9NV64 488 aa26.76■■□□□ 1.87
SNF8-209ENST00000510558 MRPL11Q9Y3B7 192 aaKnown RBP26.76■■□□□ 1.87
SNF8-209ENST00000510558 ITGB8P26012 769 aa26.75■■□□□ 1.87
SNF8-209ENST00000510558 CDK7P50613 346 aa26.75■■□□□ 1.87
SNF8-209ENST00000510558 ANTXR2P58335 489 aa26.75■■□□□ 1.87
SNF8-209ENST00000510558 GRM4Q14833 912 aa26.75■■□□□ 1.87
SNF8-209ENST00000510558 BMP2KLQ5H9B9 411 aa26.75■■□□□ 1.87
SNF8-209ENST00000510558 BAZ2BQ9UIF8 2168 aaKnown RBP26.75■■□□□ 1.87
SNF8-209ENST00000510558 RBM47A0AV96 593 aaKnown RBP26.74■■□□□ 1.87
SNF8-209ENST00000510558 B4DLN1 442 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 ARVCFO00192 962 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 ZEB2O60315 1214 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 RAG1P15918 1043 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 MRPL12P52815 198 aaKnown RBP26.74■■□□□ 1.87
SNF8-209ENST00000510558 TMEM67Q5HYA8 995 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 CXCL17Q6UXB2 119 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 MCF2L2Q86YR7 1114 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 MTMR8Q96EF0 704 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 AMNQ9BXJ7 453 aa26.74■■□□□ 1.87
SNF8-209ENST00000510558 CABYRO75952 493 aa26.73■■□□□ 1.87
SNF8-209ENST00000510558 SYTL5Q8TDW5 730 aaPredicted RBP26.73■■□□□ 1.87
SNF8-209ENST00000510558 TROAPQ12815 778 aa26.72■■□□□ 1.87
SNF8-209ENST00000510558 GPR153Q6NV75 609 aa26.72■■□□□ 1.87
SNF8-209ENST00000510558 IGDCC4Q8TDY8 1250 aa26.72■■□□□ 1.87
SNF8-209ENST00000510558 TAAR1Q96RJ0 339 aa26.72■■□□□ 1.87
SNF8-209ENST00000510558 COL20A1Q9P218 1284 aa26.72■■□□□ 1.87
SNF8-209ENST00000510558 KIAA1217Q5T5P2 1943 aa26.72■■□□□ 1.87
SNF8-209ENST00000510558 ZBTB5O15062 677 aa26.71■■□□□ 1.87
SNF8-209ENST00000510558 PPP1R11O60927 126 aaPredicted RBP26.71■■□□□ 1.87
SNF8-209ENST00000510558 SLC35G1Q2M3R5 365 aa26.71■■□□□ 1.87
SNF8-209ENST00000510558 CATIPQ7Z7H3 387 aa26.71■■□□□ 1.87
SNF8-209ENST00000510558 TBX21Q9UL17 535 aa26.71■■□□□ 1.87
SNF8-209ENST00000510558 SLC27A2O14975 620 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 PPP2R5BQ15173 497 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 SHHQ15465 462 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 C9orf50Q5SZB4 431 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 HOMER1Q86YM7 354 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 FAM126BQ8IXS8 530 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 NSUN6Q8TEA1 469 aaKnown RBP26.7■■□□□ 1.86
SNF8-209ENST00000510558 SCFD2Q8WU76 684 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 RIOX1Q9H6W3 641 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 ANO2Q9NQ90 1003 aa26.7■■□□□ 1.86
SNF8-209ENST00000510558 OPLAHO14841 1288 aa26.69■■□□□ 1.86
SNF8-209ENST00000510558 NKRFO15226 690 aaKnown RBP eCLIP26.69■■□□□ 1.86
SNF8-209ENST00000510558 TLR3O15455 904 aaKnown RBP26.69■■□□□ 1.86
SNF8-209ENST00000510558 CFBP00751 764 aa26.69■■□□□ 1.86
SNF8-209ENST00000510558 SLC43A3Q8NBI5 491 aa26.69■■□□□ 1.86
SNF8-209ENST00000510558 OR6J1Q8NGC5 347 aa26.69■■□□□ 1.86
SNF8-209ENST00000510558 RMDN3Q96TC7 470 aa26.69■■□□□ 1.86
SNF8-209ENST00000510558 LY9Q9HBG7 655 aa26.69■■□□□ 1.86
SNF8-209ENST00000510558 PRC1O43663 620 aa26.68■■□□□ 1.86
SNF8-209ENST00000510558 CYTH3O43739 400 aa26.68■■□□□ 1.86
SNF8-209ENST00000510558 ITGA7Q13683 1181 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms