RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 EFCAB13Q8IY85 973 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 PHF20Q9BVI0 1012 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 LRRC27Q9C0I9 530 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 RICTORQ6R327 1708 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 A0A087WUV0 522 aaPredicted RBP16.47■□□□□ 0.23
USP38-202ENST00000510377 IFT88Q13099 833 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 NNTQ13423 1086 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 TMC4Q7Z404 712 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
USP38-202ENST00000510377 CDCA7Q9BWT1 371 aaPredicted RBP16.47■□□□□ 0.23
USP38-202ENST00000510377 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
USP38-202ENST00000510377 MEGF6O75095 1541 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 SSR1P43307 286 aaKnown RBP16.46■□□□□ 0.23
USP38-202ENST00000510377 NEK8Q86SG6 692 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 UHMK1Q8TAS1 419 aaKnown RBP16.46■□□□□ 0.23
USP38-202ENST00000510377 CABS1Q96KC9 395 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 DPH5Q9H2P9 285 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 FOXP2O15409 715 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 PRDX5P30044 214 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
USP38-202ENST00000510377 IFI16Q16666 785 aaKnown RBP16.46■□□□□ 0.23
USP38-202ENST00000510377 TADA2BQ86TJ2 420 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 THAP9Q9H5L6 903 aa16.46■□□□□ 0.23
USP38-202ENST00000510377 MDM2Q00987 491 aaPredicted RBP16.46■□□□□ 0.22
USP38-202ENST00000510377 PLS1Q14651 629 aa16.46■□□□□ 0.22
USP38-202ENST00000510377 KRT71Q3SY84 523 aa16.46■□□□□ 0.22
USP38-202ENST00000510377 STAG2Q8N3U4 1231 aa16.46■□□□□ 0.22
USP38-202ENST00000510377 LACRTQ9GZZ8 138 aa16.46■□□□□ 0.22
USP38-202ENST00000510377 NDST4Q9H3R1 872 aa16.46■□□□□ 0.22
USP38-202ENST00000510377 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.22
USP38-202ENST00000510377 GCOM1H8Y6P7 765 aaPredicted RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 APBA3O96018 575 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 MYZAPP0CAP1 466 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 ICE2Q659A1 982 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 USP17L2Q6R6M4 530 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 ARPP21Q9UBL0 812 aaPredicted RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 TBCAO75347 108 aaKnown RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 NF2P35240 595 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 EPHB4P54760 987 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 CCDC91Q7Z6B0 441 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 CTNNBL1Q8WYA6 563 aaPredicted RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
USP38-202ENST00000510377 CTNNA1P35221 906 aaKnown RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 RPS8P62241 208 aaKnown RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 MECOMQ03112 1051 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 GFPT1Q06210 699 aaPredicted RBP16.45■□□□□ 0.22
USP38-202ENST00000510377 CCDC170Q8IYT3 715 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 TBCKQ8TEA7 893 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 TBC1D5Q92609 795 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 HPCAL4Q9UM19 191 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 JCADQ9P266 1359 aa16.45■□□□□ 0.22
USP38-202ENST00000510377 PLEKP08567 350 aaPredicted RBP16.44■□□□□ 0.22
USP38-202ENST00000510377 PPP1R2P41236 205 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 SARSP49591 514 aaKnown RBP16.44■□□□□ 0.22
USP38-202ENST00000510377 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 CCDC65Q8IXS2 484 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
USP38-202ENST00000510377 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
USP38-202ENST00000510377 ANKRD40Q6AI12 368 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 LRRC31Q6UY01 552 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 DAAM2Q86T65 1068 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 MYOCDQ8IZQ8 938 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 FBXL16Q8N461 479 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 HNRNPLLQ8WVV9 542 aaKnown RBP16.44■□□□□ 0.22
USP38-202ENST00000510377 EYA3Q99504 573 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.222e-7■■■■■ 168.6
USP38-202ENST00000510377 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
USP38-202ENST00000510377 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
USP38-202ENST00000510377 MSANTD4Q8NCY6 345 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 STIM2Q9P246 746 aa16.44■□□□□ 0.22
USP38-202ENST00000510377 LRRC53A6NM62 1247 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
USP38-202ENST00000510377 GSTO1P78417 241 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 EZH2Q15910 746 aaKnown RBP16.43■□□□□ 0.22
USP38-202ENST00000510377 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
USP38-202ENST00000510377 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 ADAMTS1Q9UHI8 967 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 CETN3O15182 167 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 GBP2P32456 591 aaPredicted RBP16.43■□□□□ 0.22
USP38-202ENST00000510377 CDKAL1Q5VV42 579 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 MSL1Q68DK7 614 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
USP38-202ENST00000510377 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 ABCB4P21439 1286 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 PEX26Q7Z412 305 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 ADSSL1Q8N142 457 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 RETREG2Q8NC44 543 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 SPATA4Q8NEY3 305 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 STK4Q13043 487 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 ARL6IP4Q66PJ3 421 aaKnown RBP16.43■□□□□ 0.22
USP38-202ENST00000510377 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 COA7Q96BR5 231 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms